Evidence map›Paper›PMID 31511316›Full record

ArticleThe Plant cell2019

Metabolically Distinct Pools of Phosphatidylcholine Are Involved in Trafficking of Fatty Acids out of and into the Chloroplast for Membrane Production.

Nischal Karki, Brandon S Johnson, Philip D Bates

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 73 citations in OpenAlex.

  1. Pooled it
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  13. M-iScience · 2024
    Article
  14. Article
  15. The Main Functions of Plastids.Methods in molecular biology (Clifton, N.J.) · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Nischal KarkiDepartment of Chemistry and Biochemistry, University of Southern Mississippi, Hattiesburg, Mississippi 39406.ORCID 0000-0002-3325-4256
Brandon S JohnsonInstitute of Biological Chemistry, Washington State University, Pullman, Washington 99164.ORCID 0000-0002-7407-8690
Philip D BatesDepartment of Chemistry and Biochemistry, University of Southern Mississippi, Hattiesburg, Mississippi 39406 phil_bates@wsu.edu.ORCID 0000-0002-1291-3363
Washington State University · USSouthern Methodist University · US

Funding

Training and Mentoring Core P20GM103476 · NIGMS · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI MICHAEL R GARRETT · 2012 to 2026
$60.2M
TRAINING IN BIOTECHNOLOGY: EMPHASIS ON PROTEIN CHEMISTRYT32GM008336 · NIGMS · WASHINGTON STATE UNIVERSITY · PI CALL, DOUGLAS R. · 1989 to 2023
$8.9M
NIGMS NIH HHS P20 GM103476NIGMS NIH HHS T32 GM008336
6 · The paper itself

Abstract

The eukaryotic pathway of galactolipid synthesis involves fatty acid synthesis in the chloroplast, followed by assembly of phosphatidylcholine (PC) in the endoplasmic reticulum (ER), and then turnover of PC to provide a substrate for chloroplast galactolipid synthesis. However, the mechanisms and classes of lipids transported between the chloroplast and the ER are unclear. PC, PC-derived diacylglycerol, phosphatidic acid, and lyso-phosphatidylcholine (LPC) have all been implicated in ER-to-chloroplast lipid transfer. LPC transport requires lysophosphatidylcholine acyltransferase (LPCAT) activity at the chloroplast to form PC before conversion to galactolipids. However, LPCAT has also been implicated in the opposite chloroplast-to-ER trafficking of newly synthesized fatty acids through PC acyl editing. To understand the role of LPC and LPCAT in acyl trafficking we produced and analyzed the Arabidopsis (

Indexed as

1-Acylglycerophosphocholine O-AcyltransferaseArabidopsisArabidopsis ProteinsCell Surface ExtensionsChloroplastsDiglyceridesFatty AcidsGlycerol-3-Phosphate O-AcyltransferasePhosphatidic AcidsPhosphatidylcholinesProtein Transport1-Acylglycerophosphocholine O-AcyltransferaseArabidopsis ProteinsAT1G12640 protein, ArabidopsisDiglyceridesFatty AcidsGlycerol-3-Phosphate O-AcyltransferasePhosphatidic AcidsPhosphatidylcholinesplastidic glycerol-3-phosphate acyltransferase, Arabidopsis

Identifiers

PMID31511316
PMCPMC6881139
OpenAlexW2973181033

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.