Evidence map›Paper›PMID 31510013›Full record

ArticleInternational journal of molecular sciences2019

MicroRNA Biogenesis Pathway Genes Are Deregulated in Colorectal Cancer.

Petra Vychytilova-Faltejskova, Alena Svobodova Kovarikova, Tomas Grolich, Vladimir Prochazka, Katerina Slaba, Tana Machackova, Jana Halamkova, Marek Svoboda, Zdenek Kala, Igor Kiss and 1 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. DDX20: A Multifunctional Complex Protein.Molecules (Basel, Switzerland) · 2023
    Review
  3. Review
  4. Article
  5. Novel Diagnostic Biomarkers in Colorectal Cancer.International journal of molecular sciences · 2022
    Review
  6. Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Petra Vychytilova-FaltejskovaCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 62500 Brno, Czech Republic. vychytilova.petra@seznam.cz.
Alena Svobodova KovarikovaCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 62500 Brno, Czech Republic. aluskakovarikova@centrum.cz.
Tomas GrolichDepartment of Surgery, University Hospital Brno, Jihlavska 340/20, 62500 Brno, Czech Republic. Grolich.Tomas@fnbrno.cz.
Vladimir ProchazkaDepartment of Surgery, University Hospital Brno, Jihlavska 340/20, 62500 Brno, Czech Republic. Prochazka.Vladimir@fnbrno.cz.
Katerina SlabaFaculty of Medicine, Masaryk University, Kamenice 5, 62500 Brno, Czech Republic. kslaba@email.cz.
Tana MachackovaCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 62500 Brno, Czech Republic. tana.machackova@gmail.com.
Jana HalamkovaDepartment of Comprehensive Cancer Care, Masaryk Memorial Cancer Institute, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic. jana.halamkova@mou.cz.
Marek SvobodaCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 62500 Brno, Czech Republic. msvoboda@mou.cz.ORCID 0000-0003-4455-0461
Zdenek KalaDepartment of Surgery, University Hospital Brno, Jihlavska 340/20, 62500 Brno, Czech Republic. Kala.Zdenek@fnbrno.cz.
Igor KissFaculty of Medicine, Masaryk University, Kamenice 5, 62500 Brno, Czech Republic. kiss@mou.cz.
Ondrej SlabyCentral European Institute of Technology, Masaryk University, Kamenice 753/5, 62500 Brno, Czech Republic. on.slaby@gmail.com.
Masaryk University · CZCentral European Institute of Technology · CZ

Funding

Ministerstvo Zdravotnictví Ceské Republiky 16-31765A
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are small non-coding RNAs that post-transcriptionally regulate gene expression. Each step of their production and maturation has to be strictly regulated, as any disruption of control mechanisms may lead to cancer. Thus, we have measured the expression of 19 genes involved in miRNAs biogenesis pathway in tumor tissues of 239 colorectal cancer (CRC) patients, 17 CRC patients with liver metastases and 239 adjacent tissues using real-time PCR. Subsequently, the expression of analyzed genes was correlated with the clinical-pathological features as well as with the survival of patients. In total, significant over-expression of all analyzed genes was observed in tumor tissues as well as in liver metastases except for LIN28A/B. Furthermore, it was shown that the deregulated levels of some of the analyzed genes significantly correlate with tumor stage, grade, location, size and lymph node positivity. Finally, high levels of DROSHA and TARBP2 were associated with shorter disease-free survival, while the over-expression of XPO5, TNRC6A and DDX17 was detected in tissues of patients with shorter overall survival and poor prognosis. Our data indicate that changed levels of miRNA biogenesis genes may contribute to origin as well as progression of CRC; thus, these molecules could serve as potential therapeutic targets.

Indexed as

Gene Expression Regulation, NeoplasticAdultAgedAged, 80 and overBiosynthetic PathwaysColorectal NeoplasmsFemaleHumansKaplan-Meier EstimateKaryopherinsLiver NeoplasmsMaleMicroRNAsMiddle AgedPrognosisRibonuclease IIIDROSHA protein, humanKaryopherinsMicroRNAsRibonuclease IIIXPO5 protein, humanbiogenesiscolorectal cancerdisease-free survivalmicroRNAoverall survivalRT-qPCR

Identifiers

PMID31510013
PMCPMC6770105
OpenAlexW2972781487

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.