Evidence map›Paper›PMID 31509826›Full record

ArticleJournal of molecular microbiology and biotechnology2019

A Riboflavin Transporter in Bdellovibrio exovorous JSS.

Irina A Rodionova, Fereshteh Heidari Tajabadi, Zhongge Zhang, Dmitry A Rodionov, Milton H Saier

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular microbiology and biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Irina A RodionovaDepartment of Molecular Biology, Division of Biological Sciences, University of California at San Diego, San Diego, California, USA.
Fereshteh Heidari TajabadiDepartment of Molecular Biology, Division of Biological Sciences, University of California at San Diego, San Diego, California, USA.
Zhongge ZhangDepartment of Molecular Biology, Division of Biological Sciences, University of California at San Diego, San Diego, California, USA.
Dmitry A RodionovSanford Burnham Prebys Medical Research Institute, San Diego, California, USA.
Milton H SaierDepartment of Molecular Biology, Division of Biological Sciences, University of California at San Diego, San Diego, California, USA, msaier@ucsd.edu.
University of California, San Diego · USSanford Burnham Prebys Medical Discovery Institute · USUniversity of Tehran · IR

Funding

The Transporter Classification Database (TCDB)R01GM077402 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SAIER, MILTON H. · 2006 to 2021
$4.7M
NIGMS NIH HHS R01 GM077402
6 · The paper itself

Abstract

The ImpX transporters of the drug/metabolite transporter superfamily were first proposed to transport riboflavin (RF; vitamin B2) based on findings of a cis-regulatory RNA element responding to flavin mononucleotide (an FMN riboswitch). Bdellovibrio exovorous JSS has a homolog belonging to this superfamily. It has 10 TMSs and shows 30% identity to the previously characterized ImpX transporter from Fusobacterium nucleatum. However, the ImpX homolog is not regulated by an FMN-riboswitch. In order to test the putative function of the ImpX homolog from B. exovorous (BexImpX), we cloned and heterologously expressed its gene. We used functional complementation, growth inhibition experiments, direct uptake experiments and inhibition studies, suggesting a high degree of specificity for RF uptake. The EC50 for growth with RF was estimated to be in the range 0.5-1 µM, estimated from the half-maximal RF concentration supporting the growth of a RF auxotrophic Escherichia coli strain, but the Khalf for RF uptake was 20 µM. Transport experiments suggested that the energy source is the proton motive force but that NaCl stimulates uptake. Thus, members of the ImpX family members are capable of RF uptake, not only in RF prototrophic species such as F.  nucleatum, but also in the B2 auxotrophic species, B. exovorous.

Indexed as

Bacterial ProteinsBdellovibrioCloning, MolecularEscherichia coliFlavin MononucleotideGenetic Complementation TestMembrane Transport ProteinsMicroorganisms, Genetically-ModifiedRegulonRiboflavinRiboswitchBacterial ProteinsFlavin MononucleotideMembrane Transport ProteinsRiboflavinRiboswitchFMN biosynthesisImpX transporterRiboflavinRoseoflavin

Identifiers

PMID31509826
PMCPMC7064401
OpenAlexW2972361934

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.