Evidence map›Paper›PMID 31509523›Full record

ArticlePLoS neglected tropical diseases2019

Frequent expansion of Plasmodium vivax Duffy Binding Protein in Ethiopia and its epidemiological significance.

Eugenia Lo, Jessica B Hostetler, Delenasaw Yewhalaw, Richard D Pearson, Muzamil M A Hamid, Karthigayan Gunalan, Daniel Kepple, Anthony Ford, Daniel A Janies, Julian C Rayner and 2 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. High prevalence of mixedmedRxiv : the preprint server for health sciences · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Relationship between Duffy Genotype/Phenotype and Prevalence ofTropical medicine and infectious disease · 2023
    Review
  15. Article
  16. Article
  17. The Black Box of Cellular and Molecular Events ofInternational journal of molecular sciences · 2022
    Review
  18. Frontiers in cellular and infection microbiology · 2022
    Review
  19. Review
  20. An open dataset ofWellcome open research · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 4 countries.

Eugenia LoDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC, United States of America.ORCID 0000-0002-5631-4709
Jessica B HostetlerLaboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, United States of America.
Delenasaw YewhalawDepartment of Medical Laboratory Sciences and Pathology, College of Public Health and Medical Sciences, Jimma University, Jimma, Ethiopia.
Richard D PearsonMalaria Programme, Wellcome Trust Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.ORCID 0000-0002-7386-3566
Muzamil M A HamidDepartment of Parasitology and Medical Entomology, University of Khartoum, Khartoum, Sudan.
Karthigayan GunalanLaboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, United States of America.
Daniel KeppleDepartment of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC, United States of America.ORCID 0000-0003-0566-3623
Anthony FordDepartment of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States of America.
Daniel A JaniesDepartment of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, United States of America.
Julian C RaynerMalaria Programme, Wellcome Trust Sanger Institute, Wellcome Genome Campus, Cambridge, United Kingdom.ORCID 0000-0002-9835-1014
Louis H MillerLaboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, United States of America.ORCID 0000-0002-3709-0092
Guiyun YanProgram in Public Health, College of Health Sciences, University of California at Irvine, Irvine, CA, United States of America.ORCID 0000-0001-8760-2925
University of North Carolina at Charlotte · USNational Institutes of Health · USWellcome Sanger Institute · GBJimma University · ETUniversity of California, Irvine · USUniversity of Khartoum · SD

Funding

University of California Health Participation in the National COVID Cohort Collaborative (N3C)UL1TR001414 · NCATS · UNIVERSITY OF CALIFORNIA-IRVINE · PI COOPER, DAN M, VILAIN, ERIC J. · 2015 to 2023
$35.1M
Vector Biology of Invasive Anopheles stephensi in Rural to Urban Landscapes in EthiopiaU19AI129326 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI Delenasaw Yewhalaw · 2017 to 2026
$19.9M
Ecology of African Highland MalariaR01AI050243 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI YAN, GUIYUN · 2001 to 2018
$8.8M
Research Training in Mosquito Genomics and Bioinformat*D43TW001505 · FIC · UNIVERSITY OF CALIFORNIA-IRVINE · PI Guiyun Yan · 2000 to 2026
$6.0M
Comparative Genomics of Plasmodium vivax: Insights into Duffy Negative Erythrocyte InvasionR15AI138002 · NIAID · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI LO, EUGENIA · 2018 to 2018
$433k
FIC NIH HHS D43 TW001505NCATS NIH HHS UL1 TR001414NIAID NIH HHS R01 AI050243NIAID NIH HHS R15 AI138002NIAID NIH HHS U19 AI129326Wellcome TrustWellcome Trust 206194/Z/17/Z
6 · The paper itself

Abstract

Plasmodium vivax invasion of human erythrocytes depends on the Duffy Binding Protein (PvDBP) which interacts with the Duffy antigen. PvDBP copy number has been recently shown to vary between P. vivax isolates in Sub-Saharan Africa. However, the extent of PvDBP copy number variation, the type of PvDBP multiplications, as well as its significance across broad samples are still unclear. We determined the prevalence and type of PvDBP duplications, as well as PvDBP copy number variation among 178 Ethiopian P. vivax isolates using a PCR-based diagnostic method, a novel quantitative real-time PCR assay and whole genome sequencing. For the 145 symptomatic samples, PvDBP duplications were detected in 95 isolates, of which 81 had the Cambodian and 14 Malagasy-type PvDBP duplications. PvDBP varied from 1 to >4 copies. Isolates with multiple PvDBP copies were found to be higher in symptomatic than asymptomatic infections. For the 33 asymptomatic samples, PvDBP was detected with two copies in two of the isolates, and both were the Cambodian-type PvDBP duplication. PvDBP copy number in Duffy-negative heterozygotes was not significantly different from that in Duffy-positives, providing no support for the hypothesis that increased copy number is a specific association with Duffy-negativity, although the number of Duffy-negatives was small and further sampling is required to test this association thoroughly.

Indexed as

DNA Copy Number VariationsAntigens, ProtozoanDuffy Blood-Group SystemErythrocytesEthiopiaFemaleGenome, ProtozoanHumansMalaria, VivaxMalePlasmodium vivaxProtozoan ProteinsReceptors, Cell SurfaceAntigens, ProtozoanDuffy antigen binding protein, PlasmodiumDuffy Blood-Group SystemProtozoan ProteinsReceptors, Cell Surface

Identifiers

PMID31509523
PMCPMC6756552
OpenAlexW2972864969

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.