Evidence map›Paper›PMID 31509205›Full record

ArticleJAMA network open2019

Prevalence and Predictability of Low-Yield Inpatient Laboratory Diagnostic Tests.

Song Xu, Jason Hom, Santhosh Balasubramanian, Lee F Schroeder, Nader Najafi, Shivaal Roy, Jonathan H Chen

Erratum issuedAbstract read
In one paragraph

Article in JAMA network open, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Probabilistic Prediction of Laboratory Test Information Yield.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2023
    Article
  9. Avoiding Biased Clinical Machine Learning Model Performance Estimates in the Presence of Label Selection.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2023
    Article
  10. Article
  11. Review
  12. Review
  13. Laboratory Demand Management Strategies-An Overview.Diagnostics (Basel, Switzerland) · 2021
    Review
  14. Review
  15. A deep learning solution to recommend laboratory reduction strategies in ICU.International journal of medical informatics · 2020
    Article
  16. Review
  17. Review
  18. Article
  19. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Song XuCenter for Biomedical Informatics Research, Department of Medicine, Stanford University, Stanford, California.
Jason HomDivision of Hospital Medicine, Department of Medicine, Stanford University, Stanford, California.
Santhosh BalasubramanianCenter for Biomedical Informatics Research, Department of Medicine, Stanford University, Stanford, California.
Lee F SchroederDepartment of Pathology, University of Michigan School of Medicine, Ann Arbor.
Nader NajafiDepartment of Medicine, University of California, San Francisco.
Shivaal RoyDepartment of Computer Science, Stanford University, Stanford, California.
Jonathan H ChenCenter for Biomedical Informatics Research, Department of Medicine, Stanford University, Stanford, California.

Funding

Stanford Center for Clinical & Translational Education and Research (Spectrum)UL1TR003142 · NCATS · STANFORD UNIVERSITY · PI O'HARA, RUTH M · 2019 to 2023
$45.0M
Stanford Center for Clinical and Translational Education and Research (SCCTER)UL1UL1RR025744 · NCRR · STANFORD UNIVERSITY · PI GREENBERG, HARRY BERNARD · 2008 to 2011
$22.4M
Data-Mining Clinical Decision Support from Electronic Health RecordsK01ES026837 · NIEHS · STANFORD UNIVERSITY · PI CHEN, JONATHAN H. · 2015 to 2019
$893k
NCATS NIH HHS UL1 TR003142NCRR NIH HHS UL1 RR025744NIEHS NIH HHS K01 ES026837
6 · The paper itself

Abstract

Importance: Laboratory testing is an important target for high-value care initiatives, constituting the highest volume of medical procedures. Prior studies have found that up to half of all inpatient laboratory tests may be medically unnecessary, but a systematic method to identify these unnecessary tests in individual cases is lacking. Objective: To systematically identify low-yield inpatient laboratory testing through personalized predictions. Design, Setting, and Participants: In this retrospective diagnostic study with multivariable prediction models, 116 637 inpatients treated at Stanford University Hospital from January 1, 2008, to December 31, 2017, a total of 60 929 inpatients treated at University of Michigan from January 1, 2015, to December 31, 2018, and 13 940 inpatients treated at the University of California, San Francisco from January 1 to December 31, 2018, were assessed. Main Outcomes and Measures: Diagnostic accuracy measures, including sensitivity, specificity, negative predictive values (NPVs), positive predictive values (PPVs), and area under the receiver operating characteristic curve (AUROC), of machine learning models when predicting whether inpatient laboratory tests yield a normal result as defined by local laboratory reference ranges. Results: In the recent data sets (July 1, 2014, to June 30, 2017) from Stanford University Hospital (including 22 664 female inpatients with a mean [SD] age of 58.8 [19.0] years and 22 016 male inpatients with a mean [SD] age of 59.0 [18.1] years), among the top 20 highest-volume tests, 792 397 were repeats of orders within 24 hours, including tests that are physiologically unlikely to yield new information that quickly (eg, white blood cell differential, glycated hemoglobin, and serum albumin level). The best-performing machine learning models predicted normal results with an AUROC of 0.90 or greater for 12 stand-alone laboratory tests (eg, sodium AUROC, 0.92 [95% CI, 0.91-0.93]; sensitivity, 98%; specificity, 35%; PPV, 66%; NPV, 93%; lactate dehydrogenase AUROC, 0.93 [95% CI, 0.93-0.94]; sensitivity, 96%; specificity, 65%; PPV, 71%; NPV, 95%; and troponin I AUROC, 0.92 [95% CI, 0.91-0.93]; sensitivity, 88%; specificity, 79%; PPV, 67%; NPV, 93%) and 10 common laboratory test components (eg, hemoglobin AUROC, 0.94 [95% CI, 0.92-0.95]; sensitivity, 99%; specificity, 17%; PPV, 90%; NPV, 81%; creatinine AUROC, 0.96 [95% CI, 0.96-0.97]; sensitivity, 93%; specificity, 83%; PPV, 79%; NPV, 94%; and urea nitrogen AUROC, 0.95 [95% CI, 0.94, 0.96]; sensitivity, 87%; specificity, 89%; PPV, 77%; NPV 94%). Conclusions and Relevance: The findings suggest that low-yield diagnostic testing is common and can be systematically identified through data-driven methods and patient context-aware predictions. Implementing machine learning models appear to be able to quantify the level of uncertainty and expected information gained from diagnostic tests explicitly, with the potential to encourage useful testing and discourage low-value testing that incurs direct costs and indirect harms.

Indexed as

HospitalizationMachine LearningAdultAgedArea Under CurveBlood Urea NitrogenClinical Laboratory TechniquesFemaleGlycated HemoglobinHemoglobinsHumansLeukocyte CountL-Lactate DehydrogenaseMaleMiddle AgedPredictive Value of TestsGlycated Hemoglobinhemoglobin A1c protein, humanHemoglobinsL-Lactate DehydrogenaseTroponin I

Identifiers

PMID31509205
PMCPMC6739729

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.