Evidence map›Paper›PMID 31507566›Full record

ArticleFrontiers in microbiology2019

Microbial Communities Associated With Passive Acidic Abandoned Coal Mine Remediation.

Truc Ly, Justin R Wright, Nicholas Weit, Christopher J McLimans, Nikea Ulrich, Vasily Tokarev, Michelle M Valkanas, Nancy Trun, Shawn Rummel, Christopher J Grant and 1 more

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Truc LyDepartment of Biology, Juniata College, Huntingdon, PA, United States.
Justin R WrightWright Labs LLC., Huntingdon, PA, United States.
Nicholas WeitDepartment of Biology, Juniata College, Huntingdon, PA, United States.
Christopher J McLimansDepartment of Biology, Juniata College, Huntingdon, PA, United States.
Nikea UlrichDepartment of Biology, Juniata College, Huntingdon, PA, United States.
Vasily TokarevWright Labs LLC., Huntingdon, PA, United States.
Michelle M ValkanasDepartment of Biological Sciences, Duquesne University, Pittsburgh, PA, United States.
Nancy TrunDepartment of Biological Sciences, Duquesne University, Pittsburgh, PA, United States.
Shawn RummelTrout Unlimited, Arlington, VA, United States.
Christopher J GrantDepartment of Biology, Juniata College, Huntingdon, PA, United States.
Regina LamendellaDepartment of Biology, Juniata College, Huntingdon, PA, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acid mine drainage (AMD) is an environmental issue that can be characterized by either acidic or circumneutral pH and high dissolved metal content in contaminated waters. It is estimated to affect roughly 3000 miles of waterways within the state of Pennsylvania, with half being acidic and half being circumneutral. To negate the harmful effects of AMD, ∼300 passive remediation systems have been constructed within the state of Pennsylvania. In this study, we evaluated the microbial community structure and functional capability associated with Middle Branch passive remediation system in central PA. Sediment and water samples were collected from each area within the passive remediation system and its receiving stream. Environmental parameters associated with the remediation system were found to explain a significant amount of variation in microbial community structure. This study revealed shifts in microbial community structure from acidophilic bacteria in raw AMD discharge to a more metabolically diverse set of taxa (i.e., Acidimicrobiales, Rhizobiales,

Indexed as

16S rRNAacid mine drainagepassive remediation systemshotgun-metagenomicssulfate reducing bacteria

Identifiers

PMID31507566
PMCPMC6716070

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.