Evidence map›Paper›PMID 31506463›Full record

ArticleScientific reports2019

Genomic and developmental characterisation of a novel bunyavirus infecting the crustacean Carcinus maenas.

Jamie Bojko, Kuttichantran Subramaniam, Thomas B Waltzek, Grant D Stentiford, Donald C Behringer

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. ICTV Virus Taxonomy Profile:The Journal of general virology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Jamie BojkoFisheries and Aquatic Science, University of Florida, Gainesville, Florida, 32653, USA. Jamie.Bojko@ufl.edu.ORCID http://orcid.org/0000-0001-5972-0844
Kuttichantran SubramaniamDepartment of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, Gainesville, FL, 32610, USA.
Thomas B WaltzekDepartment of Infectious Diseases and Immunology, College of Veterinary Medicine, University of Florida, Gainesville, FL, 32610, USA.
Grant D StentifordInternational Centre of Excellence for Aquatic Animal Health, Centre for Environment, Fisheries and Aquaculture Science, Weymouth, Dorset, DT4 8UB, UK.
Donald C BehringerFisheries and Aquatic Science, University of Florida, Gainesville, Florida, 32653, USA. behringer@ufl.edu.ORCID http://orcid.org/0000-0001-5244-471X
University of Florida · USCentre for Environment, Fisheries and Aquaculture Science · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Carcinus maenas is in the top 100 globally invasive species and harbours a wide diversity of pathogens, including viruses. We provide a detailed description for a novel bunyavirus (Carcinus maenas Portunibunyavirus 1) infecting C. maenas from its native range in the Faroe Islands. The virus genome is tripartite, including large (L) (6766 bp), medium (M) (3244 bp) and small (S) (1608 bp) negative sense, single-stranded RNA segments. Individual genomic segments are flanked by 4 bp regions of similarity (CCUG). The segments encode an RNA-dependent RNA-polymerase, glycoprotein, non-structural protein with a Zinc-Finger domain and a nucleoprotein. Most show highest identity to the 'Wenling Crustacean Virus 9' from an unidentified crustacean host. Phylogenomics of crustacean-infecting bunyaviruses place them across multiple bunyavirus families. We discuss the diversity of crustacean bunyaviruses and provide an overview of how these viruses may affect the health and survival of crustacean hosts, including those inhabiting niches outside of their native range.

Indexed as

Genetics, PopulationGenetic VariationGenome, ViralPhylogenyAmino Acid SequenceAnimalsBrachyuraBunyaviridae InfectionsOrthobunyavirusSequence Homology

Identifiers

PMID31506463
PMCPMC6736955
OpenAlexW2972415681

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.