Evidence map›Paper›PMID 31506298›Full record

ArticleThe Journal of biological chemistry2019

Hydrogen exchange of chemoreceptors in functional complexes suggests protein stabilization mediates long-range allosteric coupling.

Xuni Li, Stephen J Eyles, Lynmarie K Thompson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 24 citations in OpenAlex.

  1. Signaling mechanism of the transmembrane energy receptor Aer.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Microorganisms · 2025
    Review
  6. Article
  7. The structural logic of dynamic signaling in the Escherichia coli serine chemoreceptor.Protein science : a publication of the Protein Society · 2024
    Article
  8. The Structural Logic of Dynamic Signaling in thebioRxiv : the preprint server for biology · 2024
    Article
  9. Signal integration in chemoreceptor complexes.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Article
  11. Bacterial chemoreceptor signaling complexes control kinase activity by stabilizing the catalytic domain of CheA.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Structural signatures ofProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Xuni LiDepartment of Chemistry, University of Massachusetts Amherst, Amherst, Massachusetts 01003.
Stephen J EylesDepartment of Biochemistry and Molecular Biology, University of Massachusetts Amherst, Amherst, Massachusetts 01003.ORCID 0000-0003-0451-2903
Lynmarie K ThompsonDepartment of Chemistry, University of Massachusetts Amherst, Amherst, Massachusetts 01003 thompson@chem.umass.edu.ORCID 0000-0002-9447-6776
University of Massachusetts Amherst · US

Funding

Assembly and Function of Bacterial Chemotaxis Receptor Signaling ComplexesR01GM120195 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI THOMPSON, LYNMARIE K. · 2017 to 2023
$2.1M
Assembly and Function of Bacterial Chemotaxis Receptor Signaling ComplexesR01GM085288 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI THOMPSON, LYNMARIE K. · 2010 to 2013
$1.2M
NIGMS NIH HHS R01 GM085288NIGMS NIH HHS R01 GM120195
6 · The paper itself

Abstract

Bacterial chemotaxis receptors form extended hexagonal arrays that integrate and amplify signals to control swimming behavior. Transmembrane signaling begins with a 2-Å ligand-induced displacement of an α helix in the periplasmic and transmembrane domains, but it is unknown how the cytoplasmic domain propagates the signal an additional 200 Å to control the kinase CheA bound to the membrane-distal tip of the receptor. The receptor cytoplasmic domain has previously been shown to be highly dynamic as both a cytoplasmic fragment (CF) and within the intact chemoreceptor; modulation of its dynamics is thought to play a key role in signal propagation. This hydrogen deuterium exchange-MS (HDX-MS) study of functional complexes of CF, CheA, and CheW bound to vesicles in native-like arrays reveals that the CF is well-ordered only in its protein interaction region where it binds CheA and CheW. We observe rapid exchange throughout the rest of the CF, with both uncorrelated (EX2) and correlated (EX1) exchange patterns, suggesting the receptor cytoplasmic domain retains disorder even within functional complexes. HDX rates are increased by inputs that favor the kinase-off state. We propose that chemoreceptors achieve long-range allosteric control of the kinase through a coupled equilibrium: CheA binding in a kinase-on conformation stabilizes the cytoplasmic domain, and signaling inputs that destabilize this domain (ligand binding and demethylation) disfavor CheA binding such that it loses key contacts and reverts to a kinase-off state. This study reveals the mechanistic role of an intrinsically disordered region of a transmembrane receptor in long-range allostery.

Indexed as

Allosteric SiteAllosteric RegulationDeuterium Exchange MeasurementEscherichia coli ProteinsHistidine KinaseLiposomesMethyl-Accepting Chemotaxis ProteinsProtein StabilitySignal TransductioncheA protein, E coliCheW protein, E coliEscherichia coli ProteinsHistidine KinaseLiposomesMethyl-Accepting Chemotaxis Proteinsallosteric regulationbacterial signal transductionchemoreceptorchemotaxishydrogen-deuterium exchangeintrinsically disordered proteinmembrane proteinprotein complexreceptor structure-functiontransmembrane signaling

Identifiers

PMID31506298
PMCPMC6827319
OpenAlexW2973169185

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.