Evidence map›Paper›PMID 31505627›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2019

Community-acquired Invasive Bacterial Disease in Urban Gambia, 2005-2015: A Hospital-based Surveillance.

Saffiatou Darboe, Uduak Okomo, Abdul-Khalie Muhammad, Buntung Ceesay, Mamadou Jallow, Effua Usuf, Sam Tweed, Edem Akpalu, Brenda Kwambana-Adams, Samuel Kariuki and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 2 pooled it
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 2 syntheses or guidelines pooled it, 36 citations in OpenAlex.

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  11. Invasive atypical non-typhoidalMicrobial genomics · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 5 countries.

Saffiatou DarboeMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Uduak OkomoMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Abdul-Khalie MuhammadMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Buntung CeesayMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Mamadou JallowMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Effua UsufMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Sam TweedThe School of Medicine, Medical Sciences and Nutrition, University of Aberdeen, United Kingdom.
Edem AkpaluService de Pediatrie, Centre Hospitalier Universitaire Sylvanus Olypio, Lome, Togo.
Brenda Kwambana-AdamsMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Samuel KariukiKenya Medical Research Institute, Nairobi.
Martin AntonioMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Richard S BradburySchool of Medical and Applied Sciences, Central Queensland University, Australia.
Karen ForrestMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Thushan I de SilvaMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Bolarinde Joseph LawalMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Davis NwakanmaMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Ousman SeckaMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
Anna RocaMedical Research Council Unit The Gambia at the London School of Hygiene and Tropical Medicine, Banjul.
MRC Unit the Gambia · GMCentral Queensland University · AUCentre Hospitalier Universitaire de Tokoin · TGKenya Medical Research Institute · KELondon School of Hygiene & Tropical Medicine · GBUniversity of Aberdeen · GB

Funding

Medical Research Council
6 · The paper itself

Abstract

backgroundInvasive bacterial diseases cause significant disease and death in sub-Saharan Africa. Several are vaccine preventable, although the impact of new vaccines and vaccine policies on disease patterns in these communities is poorly understood owing to limited surveillance data.

methodsWe conducted a hospital-based surveillance of invasive bacterial diseases in The Gambia where blood and cerebrospinal fluid (CSF) samples of hospitalized participants were processed. Three surveillance periods were defined in relation to the introduction of pneumococcal conjugate vaccines (PCVs), before (2005- 2009), during (2010-2011) and after (2012-2015) PCV introduction. We determined the prevalences of commonly isolated bacteria and compared them between the different surveillance periods.

resultsA total of 14 715 blood and 1103 CSF samples were collected over 11 years; overall, 1045 clinically significant organisms were isolated from 957 patients (972 organisms [6.6%] from blood and 73 [6.6%] from CSF). The most common blood culture isolates were Streptococcus pneumoniae (24.9%), Staphylococcus aureus (22.0%), Escherichia coli (10.9%), and nontyphoidal Salmonella (10.0%). Between the pre-PCV and post-PCV eras, the prevalence of S. pneumoniae bacteremia dropped across all age groups (from 32.4% to 16.5%; odds ratio, 0.41; 95% confidence interval, .29-.58) while S. aureus increased in prevalence, becoming the most prevalent bacteria (from 16.9% to 27.2%; 1.75; 1.26-2.44). Overall, S. pneumoniae (53.4%), Neisseria meningitidis (13.7%), and Haemophilus influenzae (12.3%) were the predominant isolates from CSF. Antimicrobial resistance to common antibiotics was low.

conclusionsOur findings demonstrate that surveillance data on the predominant pathogens associated with invasive disease is necessary to inform vaccine priorities and appropriate management of patients.

Indexed as

Sentinel SurveillanceUrban PopulationAnti-Bacterial AgentsBacteremiaBacterial InfectionsChild, PreschoolCommunity-Acquired InfectionsGambiaHaemophilus influenzaeHospitalsHumansInfantMeningitis, BacterialNeisseria meningitidisPrevalenceSerotypingAnti-Bacterial Agentsbacteremiacommunity-acquired infectioninvasive bacterial diseasemeningitisvaccine preventable disease

Identifiers

PMID31505627
PMCPMC6761311
OpenAlexW2971615638

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.