ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2019
Screening for differential expression of genes for resistance to Sitodiplosis mosellana in bread wheat via BSR-seq analysis.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed.
- Identification and characterization of a novel powdery mildew resistance gene PmCWI45575 in wild emmer wheat.BMC plant biology · 2025Article
- Mapping and characterization of a novel powdery mildew resistance locus (PM2) inFrontiers in plant science · 2025Article
- Genome-wide association study and selective sweep analysis uncover candidate genes controlling curd branch length in cauliflower.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Bulked segregant RNA-seq reveals complex resistance expression profile to powdery mildew in wild emmer wheat W762.Frontiers in plant science · 2024Article
- The putative vacuolar processing enzyme gene TaVPE3cB is a candidate gene for wheat stem pith-thickness.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Advances in the Mining of Disease Resistance Genes fromPlants (Basel, Switzerland) · 2023Review
- Screening of Candidate Genes Associated with Brown Stripe Resistance in Sugarcane via BSR-seq Analysis.International journal of molecular sciences · 2022Article
- A chromosome-level genome assembly of the orange wheat blossom midge, Sitodiplosis mosellana Géhin (Diptera: Cecidomyiidae) provides insights into the evolution of a detoxification system.G3 (Bethesda, Md.) · 2022Article
- PNGSeqR: An R Package for Rapid Candidate Gene Selection through Pooled Next-Generation Sequencing.Plants (Basel, Switzerland) · 2022Article
- Genomics and Pathways Involved in Maize Resistance toFrontiers in plant science · 2022Article
- Comparative Analysis of Coding and Non-Coding Features within Insect Tolerance Loci in Wheat with Their Homologs in Cereal Genomes.International journal of molecular sciences · 2021Article
- Genomic Approaches to Identify Molecular Bases of Crop Resistance to Diseases and to Develop Future Breeding Strategies.International journal of molecular sciences · 2021Review
- Genetic analysis of oviposition deterrence to orange wheat blossom midge in spring wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Appraisal of wheat genomics for gene discovery and breeding applications: a special emphasis on advances in Asia.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Review
- Molecular mapping of major QTL conferring resistance to orange wheat blossom midge (Sitodiplosis mosellana) in Chinese wheat varieties with selective populations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Bulked Segregant RNA-Seq Reveals Distinct Expression Profiling in Chinese Wheat Cultivar Jimai 23 Responding to Powdery Mildew.Frontiers in genetics · 2020Article
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8 authors.
Funding
Abstract
key messageFive putative candidate genes for OWBM resistance in Chinese winter wheat 'Jimai 24' were identified via BSR-seq and differential expression analyses. Orange wheat blossom midge (OWBM), Sitodiplosis mosellana, is one of the most serious threats to wheat production worldwide. Conventional gene mapping methods to identify genes require significant amounts of financial support and time. Here, bulked segregant RNA-seq (BSR-seq) was applied to profile candidate genes and develop associated markers for OWBM resistance. Previously, we identified a major QTL (QSm.hebau-4A) for OWBM resistance on the long arm of chromosome 4A. In this study, we aimed at screening differentially expressed resistance genes associated with this QTL. Twelve differentially expressed genes (DEGs) were obtained based on BSR-seq and differential expression analyses. Among them, four were confirmed to be associated with OWBM resistance via quantitative reverse transcription PCR, using an additional set of wheat samples subjected to OWBM invasion. One SPI-like gene and one Malectin-like gene were revealed by gene annotation, respectively. Sequencing results confirmed that the four DEGs and the SPI gene had SNP polymorphisms between wheat parents. All these five resistance-related genes for OWBM were located in the same genomic region with QSm.hebau-4A. Furthermore, six new markers developed based on sequences of the five genes were also mapped in the same genomic region using genetic population. These five genes may be the candidate genes for OWBM resistance in Chinese wheat 'Jimai 24' and should be the targets for further positional isolation.
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