Evidence map›Paper›PMID 31501901›Full record

ArticleMolecular biology and evolution2020

Archaeal Ribosomal Proteins Possess Nuclear Localization Signal-Type Motifs: Implications for the Origin of the Cell Nucleus.

Sergey Melnikov, Hui-Si Kwok, Kasidet Manakongtreecheep, Antonia van den Elzen, Carson C Thoreen, Dieter Söll

Open access · greenAbstract read
In one paragraph

Article in Molecular biology and evolution, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  4. On the origin of the nucleus: a hypothesis.Microbiology and molecular biology reviews : MMBR · 2023
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Sergey MelnikovDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT.
Hui-Si KwokDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT.
Kasidet ManakongtreecheepDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT.
Antonia van den ElzenDepartment of Cellular and Molecular Physiology, Yale University, New Haven, CT.
Carson C ThoreenDepartment of Cellular and Molecular Physiology, Yale University, New Haven, CT.
Dieter SöllDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT.
Yale University · US

Funding

Studies of Transfer RNAR35GM122560 · NIGMS · YALE UNIVERSITY · PI SOLL, DIETER · 2017 to 2022
$5.6M
Translational control of gene expression by the mTOR pathwayR01GM125955 · NIGMS · YALE UNIVERSITY · PI THOREEN, CARSON CORNELL · 2017 to 2021
$1.8M
NIGMS NIH HHS R01 GM125955NIGMS NIH HHS R35 GM122560
6 · The paper itself

Abstract

Eukaryotic cells are divided into the nucleus and the cytosol, and, to enter the nucleus, proteins typically possess short signal sequences, known as nuclear localization signals (NLSs). Although NLSs have long been considered as features unique to eukaryotic proteins, we show here that similar or identical protein segments are present in ribosomal proteins from the Archaea. Specifically, the ribosomal proteins uL3, uL15, uL18, and uS12 possess NLS-type motifs that are conserved across all major branches of the Archaea, including the most ancient groups Microarchaeota and Diapherotrites, pointing to the ancient origin of NLS-type motifs in the Archaea. Furthermore, by using fluorescence microscopy, we show that the archaeal NLS-type motifs can functionally substitute eukaryotic NLSs and direct the transport of ribosomal proteins into the nuclei of human cells. Collectively, these findings illustrate that the origin of NLSs preceded the origin of the cell nucleus, suggesting that the initial function of NLSs was not related to intracellular trafficking, but possibly was to improve recognition of nucleic acids by cellular proteins. Overall, our study reveals rare evolutionary intermediates among archaeal cells that can help elucidate the sequence of events that led to the origin of the eukaryotic cell.

Indexed as

Biological EvolutionEukaryotic CellsNuclear Localization SignalsAmino Acid MotifsAmino Acid SequenceAnimalsArchaeal ProteinsHumansRibosomal ProteinsArchaeal ProteinsNuclear Localization SignalsRibosomal Proteinsnuclear localization signalsorigin of the nucleusribosomal proteinstranslation

Identifiers

PMID31501901
PMCPMC6984363
OpenAlexW2972556458

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.