Evidence map›Paper›PMID 31501510›Full record

ArticleMolecular psychiatry2020

Multi-omic biomarker identification and validation for diagnosing warzone-related post-traumatic stress disorder.

Kelsey R Dean, Rasha Hammamieh, Synthia H Mellon, Duna Abu-Amara, Janine D Flory, Guia Guffanti, Kai Wang, Bernie J Daigle, Aarti Gautam, Inyoul Lee and 30 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular psychiatry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed, 1 pooled it
9.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 1 synthesis or guideline pooled it, 101 citations in OpenAlex.

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  18. The lipidome of posttraumatic stress disorder.bioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

40 authors at 11 institutions in 3 countries.

Kelsey R Dean *Department of Systems Biology, Harvard University, Cambridge, MA, USA.
Rasha Hammamieh *Integrative Systems Biology, US Army Medical Research and Materiel Command, USACEHR, Fort Detrick, Frederick, MD, USA.
Synthia H Mellon *Department of Obstetrics, Gynecology, & Reproductive Sciences, University of California, San Francisco, CA, USA.
Duna Abu-AmaraDepartment of Psychiatry, New York Langone Medical School, New York, NY, USA.
Janine D FloryDepartment of Psychiatry, James J. Peters VA Medical Center, Bronx, NY, USA.
Guia GuffantiDepartment of Psychiatry, McLean Hospital, Belmont, MA, USA.
Kai WangInstitute for Systems Biology, Seattle, WA, USA.
Bernie J DaigleDepartments of Biological Sciences and Computer Science, The University of Memphis, Memphis, TN, USA.
Aarti GautamIntegrative Systems Biology, US Army Medical Research and Materiel Command, USACEHR, Fort Detrick, Frederick, MD, USA.
Inyoul LeeInstitute for Systems Biology, Seattle, WA, USA.
Ruoting YangAdvanced Biomedical Computing Center, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
Lynn M AlmliDepartment of Psychiatry and Behavioral Sciences, Emory University, Atlanta, GA, USA.
F Saverio BersaniDepartment of Psychiatry, University of California, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-7555-8020
Nabarun ChakrabortyUSACEHR, The Geneva Foundation, Frederick, MD, USA.
Duncan DonohueUSACEHR, The Geneva Foundation, Frederick, MD, USA.
Kimberly KerleyDepartment of Psychiatry and Behavioral Sciences, Emory University, Atlanta, GA, USA.
Taek-Kyun KimInstitute for Systems Biology, Seattle, WA, USA.
Eugene LaskaDepartment of Psychiatry, New York Langone Medical School, New York, NY, USA.
Min Young LeeInstitute for Systems Biology, Seattle, WA, USA.
Daniel LindqvistDepartment of Psychiatry, University of California, San Francisco, CA, USA.
Adriana LoriDepartment of Psychiatry and Behavioral Sciences, Emory University, Atlanta, GA, USA.
Liangqun LuDepartments of Biological Sciences and Computer Science, The University of Memphis, Memphis, TN, USA.
Burook MisganawHarvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA.
Seid MuhieUSACEHR, The Geneva Foundation, Frederick, MD, USA.
Jennifer NewmanDepartment of Psychiatry, New York Langone Medical School, New York, NY, USA.
Nathan D PriceInstitute for Systems Biology, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-4157-0267
Shizhen QinInstitute for Systems Biology, Seattle, WA, USA.
Victor I ReusDepartment of Psychiatry, University of California, San Francisco, CA, USA.
Carole SiegelDepartment of Psychiatry, New York Langone Medical School, New York, NY, USA.
Pramod R SomvanshiHarvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA.
Gunjan S ThakurHarvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA.
Yong ZhouInstitute for Systems Biology, Seattle, WA, USA.
PTSD Systems Biology Consortium
Leroy HoodInstitute for Systems Biology, Seattle, WA, USA.
Kerry J ResslerDepartment of Psychiatry, McLean Hospital, Belmont, MA, USA.
Owen M WolkowitzDepartment of Psychiatry, University of California, San Francisco, CA, USA.
Rachel YehudaDepartment of Psychiatry, James J. Peters VA Medical Center, Bronx, NY, USA.
Marti JettIntegrative Systems Biology, US Army Medical Research and Materiel Command, USACEHR, Fort Detrick, Frederick, MD, USA.
Francis J DoyleHarvard John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA. frank_doyle@seas.harvard.edu.
Charles MarmarDepartment of Psychiatry, New York Langone Medical School, New York, NY, USA.
Institute for Systems Biology · USHarvard University · USNYU Langone Health · USUniversity of California, San Francisco · USEmory University · USThe Geneva Foundation · USUnited States Army Medical Research and Development Command · USJames J. Peters VA Medical Center · USMcLean Hospital · USUniversity of Memphis · USFrederick National Laboratory for Cancer Research · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Post-traumatic stress disorder (PTSD) impacts many veterans and active duty soldiers, but diagnosis can be problematic due to biases in self-disclosure of symptoms, stigma within military populations, and limitations identifying those at risk. Prior studies suggest that PTSD may be a systemic illness, affecting not just the brain, but the entire body. Therefore, disease signals likely span multiple biological domains, including genes, proteins, cells, tissues, and organism-level physiological changes. Identification of these signals could aid in diagnostics, treatment decision-making, and risk evaluation. In the search for PTSD diagnostic biomarkers, we ascertained over one million molecular, cellular, physiological, and clinical features from three cohorts of male veterans. In a discovery cohort of 83 warzone-related PTSD cases and 82 warzone-exposed controls, we identified a set of 343 candidate biomarkers. These candidate biomarkers were selected from an integrated approach using (1) data-driven methods, including Support Vector Machine with Recursive Feature Elimination and other standard or published methodologies, and (2) hypothesis-driven approaches, using previous genetic studies for polygenic risk, or other PTSD-related literature. After reassessment of ~30% of these participants, we refined this set of markers from 343 to 28, based on their performance and ability to track changes in phenotype over time. The final diagnostic panel of 28 features was validated in an independent cohort (26 cases, 26 controls) with good performance (AUC = 0.80, 81% accuracy, 85% sensitivity, and 77% specificity). The identification and validation of this diverse diagnostic panel represents a powerful and novel approach to improve accuracy and reduce bias in diagnosing combat-related PTSD.

Indexed as

Military PersonnelStress Disorders, Post-TraumaticVeteransBiomarkersBrainHumansMaleBiomarkers

Identifiers

PMID31501510
PMCPMC7714692
OpenAlexW2972380287

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.