Evidence map›Paper›PMID 31501299›Full record

ArticlePlant physiology2020

Phytochrome Coordinates with a hnRNP to Regulate Alternative Splicing via an Exonic Splicing Silencer.

Bou-Yun Lin, Chueh-Ju Shih, Hsin-Yu Hsieh, Hsiu-Chen Chen, Shih-Long Tu

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
5.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. SWAP1-SFPS-RRC1 splicing factor complex modulates pre-mRNA splicing to promote photomorphogenesis inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Light-regulated pre-mRNA splicing in plants.Current opinion in plant biology · 2021
    Review
  14. Phytochrome Signaling Networks.Annual review of plant biology · 2021
    Review
  15. Article
  16. NCell proliferation · 2020
    Review
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Bou-Yun LinInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0002-5776-5253
Chueh-Ju ShihInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan.ORCID 0000-0002-2864-8541
Hsin-Yu HsiehInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan.
Hsiu-Chen ChenInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan.
Shih-Long TuInstitute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan tsl@gate.sinica.edu.tw.ORCID 0000-0001-9436-278X
National Chung Hsing University · TWInstitute of Plant and Microbial Biology, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants perceive environmental light conditions and optimize their growth and development accordingly by regulating gene activity at multiple levels. Photoreceptors are important for light sensing and downstream gene regulation. Phytochromes, red/far-red light receptors, are believed to regulate light-responsive alternative splicing, but little is known about the underlying mechanism. Alternative splicing is primarily regulated by transacting factors, such as splicing regulators, and by cis-acting elements in precursor mRNA. In the moss

Indexed as

Alternative SplicingBryopsidaExonsHeterogeneous-Nuclear RibonucleoproteinsPhytochromePlant ProteinsHeterogeneous-Nuclear RibonucleoproteinsPhytochromePlant Proteins

Identifiers

PMID31501299
PMCPMC6945828
OpenAlexW2972803389

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.