Evidence map›Paper›PMID 31501224›Full record

ArticleMolecular & cellular proteomics : MCP2019

Analysis of Brain and Cerebrospinal Fluid from Mouse Models of the Three Major Forms of Neuronal Ceroid Lipofuscinosis Reveals Changes in the Lysosomal Proteome.

David E Sleat, Jennifer A Wiseman, Mukarram El-Banna, Haiyan Zheng, Caifeng Zhao, Amenah Soherwardy, Dirk F Moore, Peter Lobel

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 42 citations in OpenAlex.

  1. GutGut microbes · 2026
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  12. A HomozygousGenes · 2023
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  19. Altered protein secretion in Batten disease.Disease models & mechanisms · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

David E SleatCenter for Advanced Biotechnology and Medicine, Piscataway, NJ 08854; Department of Biochemistry and Molecular Biology, Robert-Wood Johnson Medical School, Rutgers Biomedical Health Sciences, Piscataway, NJ 08854. Electronic address: sleat@cabm.rutgers.edu.
Jennifer A WisemanCenter for Advanced Biotechnology and Medicine, Piscataway, NJ 08854.
Mukarram El-BannaCenter for Advanced Biotechnology and Medicine, Piscataway, NJ 08854.
Haiyan ZhengCenter for Advanced Biotechnology and Medicine, Piscataway, NJ 08854.
Caifeng ZhaoCenter for Advanced Biotechnology and Medicine, Piscataway, NJ 08854.
Amenah SoherwardyCenter for Advanced Biotechnology and Medicine, Piscataway, NJ 08854.
Dirk F MooreDepartment of Biostatistics, School of Public Health, Rutgers - The State University of New Jersey, Piscataway, NJ 08854.
Peter LobelCenter for Advanced Biotechnology and Medicine, Piscataway, NJ 08854; Department of Biochemistry and Molecular Biology, Robert-Wood Johnson Medical School, Rutgers Biomedical Health Sciences, Piscataway, NJ 08854. Electronic address: lobel@cabm.rutgers.edu.
Rutgers, The State University of New Jersey · US

Funding

TRANSCRIPTIONAL PROFILINGP30CA072720 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI Tracie Saunders · 1997 to 2026
$94.5M
Rutgers Mass Spectrometry Core for Integrative Neuroscience ResearchP30NS046593 · NINDS · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI LI, HONG, LOBEL, PETER · 2004 to 2018
$9.9M
NOVEL LYSOSOMAL ENZYME DEFICIENT IN BATTEN DISEASER01NS037918 · NINDS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI SLEAT, DAVID EDWARD · 1998 to 2023
$7.3M
A Mass Spectrometry System for Quantitative ProteomicsS10OD016400 · OD · RBHS-ROBERT WOOD JOHNSON MEDICAL SCHOOL · PI LOBEL, PETER · 2014 to 2014
$561k
High Resolution LC-MS/MS SystemS10RR024584 · NCRR · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI LOBEL, PETER · 2009 to 2009
$500k
Biomarker discovery for juvenile neuronal ceroid lipofuscinosisR21NS088786 · NINDS · RBHS-ROBERT WOOD JOHNSON MEDICAL SCHOOL · PI SLEAT, DAVID EDWARD · 2015 to 2016
$437k
NCI NIH HHS P30 CA072720NCRR NIH HHS S10 RR024584NIH HHS S10 OD016400NINDS NIH HHS P30 NS046593NINDS NIH HHS R01 NS037918NINDS NIH HHS R21 NS088786
6 · The paper itself

Abstract

Treatments are emerging for the neuronal ceroid lipofuscinoses (NCLs), a group of similar but genetically distinct lysosomal storage diseases. Clinical ratings scales measure long-term disease progression and response to treatment but clinically useful biomarkers have yet to be identified in these diseases. We have conducted proteomic analyses of brain and cerebrospinal fluid (CSF) from mouse models of the most frequently diagnosed NCL diseases: CLN1 (infantile NCL), CLN2 (classical late infantile NCL) and CLN3 (juvenile NCL). Samples were obtained at different stages of disease progression and proteins quantified using isobaric labeling. In total, 8303 and 4905 proteins were identified from brain and CSF, respectively. We also conduced label-free analyses of brain proteins that contained the mannose 6-phosphate lysosomal targeting modification. In general, we detect few changes at presymptomatic timepoints but later in disease, we detect multiple proteins whose expression is significantly altered in both brain and CSF of CLN1 and CLN2 animals. Many of these proteins are lysosomal in origin or are markers of neuroinflammation, potentially providing clues to underlying pathogenesis and providing promising candidates for further validation.

Indexed as

AminopeptidasesAnimalsBiomarkersBrainDipeptidyl-Peptidases and Tripeptidyl-PeptidasesDisease Models, AnimalFemaleLysosomesMaleMembrane GlycoproteinsMiceMice, Inbred C57BLMice, KnockoutMolecular ChaperonesNeuronal Ceroid-LipofuscinosesProteomeAminopeptidasesBiomarkersCLN3 protein, mouseDipeptidyl-Peptidases and Tripeptidyl-PeptidasesMembrane GlycoproteinsMolecular Chaperonespalmitoyl-protein thioesteraseProteomeSerine ProteasesThiolester HydrolasesTpp1 protein, mouseTripeptidyl-Peptidase 1biomarker: prognosticcerebrospinal fluidglycoproteins*inflammatory responselysosomemass spectrometryMouse modelsneurodegenerative diseasesneuronal ceroid lipofuscinosis

Identifiers

PMID31501224
PMCPMC6823856
OpenAlexW2972494746

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.