Evidence map›Paper›PMID 31500584›Full record

ArticleBMC infectious diseases2019

HLA-B*57:01 allele prevalence in treatment-Naïve HIV-infected patients from Colombia.

Ernesto Martínez Buitrago, José Millán Oñate, José Fernando García-Goez, Jorge Álvarez, William Lenis, Luz Marina Sañudo, Luisa Consuelo Rubiano

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ernesto Martínez BuitragoFundación Red de VIH del Valle del Cauca (REVIVA), Cali, Colombia. emarbui@gmail.com.ORCID http://orcid.org/0000-0002-0959-8593
José Millán OñateFundación Red de VIH del Valle del Cauca (REVIVA), Cali, Colombia.
José Fernando García-GoezFundación Red de VIH del Valle del Cauca (REVIVA), Cali, Colombia.
Jorge ÁlvarezFundación Red de VIH del Valle del Cauca (REVIVA), Cali, Colombia.
William LenisFundación Red de VIH del Valle del Cauca (REVIVA), Cali, Colombia.
Luz Marina SañudoFundación Red de VIH del Valle del Cauca (REVIVA), Cali, Colombia.
Luisa Consuelo RubianoFundación Red de VIH del Valle del Cauca (REVIVA), Cali, Colombia.
Fundación Valle del Lili · COPontificia Universidad Javeriana · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe HLA-B*57:01 allele is associated with a hypersensitivity reaction to abacavir. Due to the lack of knowledge of HLA-B*57:01 prevalence in Colombia, routine screening is not performed and is not recommended by the national guidelines. We aimed to determine the prevalence of HLA-B*57:01 in HIV population from Colombia.

methodsThis cross-sectional study included naïve HIV-infected adults from 13 cities of the country. The presence of HLA-B*57:01 was determined by using SSP-PCR in blood samples. Prevalence rates were stratified by sex, race, and region of origin.

resultsHLA-B*57:01 allele prevalence in Colombian HIV-infected individuals was 2.7%. When stratifying for the race, the prevalence was 4% for whites, 2.6% for other race (mainly mestizo), and 1.9% for Afro-Colombians. The prevalence varied from 0% up to 11.4% depending on the department of origin. The highest prevalence rates were found in Caldas (11.4%), Antioquia (5%), Risaralda (4.8%), and Valle del Cauca (4.3%). When distributed by country zones, the central, with a racial predominance of Caucasians and mestizos, was the highest (6.0%, 0R = 4.1, CI 1.2-12.8, p = 0,016).

conclusionsThe overall prevalence of HLA-B*57:01 in Colombia was lower than the reported rates for other Latin American countries such as Brazil, Costa Rica, and Argentina, but similar in comparison to Chile and Mexico. The diversity in the racial and ethnic heritage shown in our data supports the recommendation to implement routine screening for the HLA-B*57:01 allele before initiation of abacavir-containing antiretroviral therapy in the Colombian HIV management guidelines.

Indexed as

AdultAllelesAnti-Retroviral AgentsColombiaCross-Sectional StudiesDrug HypersensitivityFemaleHIV InfectionsHLA-B AntigensHumansMaleMiddle AgedPrevalenceYoung AdultAnti-Retroviral AgentsHLA-B*57:01 antigenHLA-B AntigensAbacavirAntiretroviral therapyHIV infectionHLA-B*57:01HypersensitivityPharmacogenetics. Cross-sectional study

Identifiers

PMID31500584
PMCPMC6734234
OpenAlexW2972115144

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.