Evidence map›Paper›PMID 31500571›Full record

ArticleBMC plant biology2019

A novel R2R3-MYB from grape hyacinth, MaMybA, which is different from MaAN2, confers intense and magenta anthocyanin pigmentation in tobacco.

Kaili Chen, Lingjuan Du, Hongli Liu, Yali Liu

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 59 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Kaili ChenCollege of Landscape Architecture and Arts, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China.
Lingjuan DuCollege of Landscape Architecture and Arts, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China.
Hongli LiuCollege of Landscape Architecture and Arts, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China.
Yali LiuCollege of Landscape Architecture and Arts, Northwest A&F University, Yangling, 712100, Shaanxi, People's Republic of China. lyl6151@126.com.ORCID http://orcid.org/0000-0003-3265-5119
Northwest A&F University · CNNorth West Agriculture and Forestry University · CN

Funding

the National Natural Science Foundation of China 31170652the National Natural Science Foundation of China 31471905the Natural Science Basic Research Plan in the Shaanxi Province of China 2017JQ3019
6 · The paper itself

Abstract

backgroundThe primary pigments in flowers are anthocyanins, the biosynthesis of which is mainly regulated by R2R3-MYBs. Muscari armeniacum is an ornamental garden plant with deep cobalt blue flowers containing delphinidin-based anthocyanins. An anthocyanin-related R2R3-MYB MaAN2 has previously been identified in M. armeniacum flowers; here, we also characterized a novel R2R3-MYB MaMybA, to determine its function and highlight similarities and differences between MaMybA and MaAN2.

resultsIn this study, a novel anthocyanin-related R2R3-MYB gene was isolated from M. armeniacum flowers and functionally identified. A sequence alignment showed that MaMybA contained motifs typically conserved with MaAN2 and its orthologs. However, the shared identity of the entire amino acid sequence between MaMybA and MaAN2 was 43.5%. Phylogenetic analysis showed that they were both clustered into the AN2 subgroup of the R2R3-MYB family, but not in the same branch. We also identified a IIIf bHLH protein, MabHLH1, in M. armeniacum flowers. A bimolecular fluorescence complementation assay showed that MabHLH1 interacted with MaMybA or MaAN2 in vivo; a dual luciferase assay indicated that MaMybA alone or in interaction with MabHLH1 could regulate the expression of MaDFR and AtDFR, but MaAN2 required MabHLH1 to do so. When overexpressing MaMybA in Nicotiana tabacum 'NC89', the leaves, petals, anthers, and calyx of transgenic tobacco showed intense and magenta anthocyanin pigments, whereas those of OE-MaAN2 plants had lighter pigmentation. However, the ovary wall and seed skin of OE-MaMybA tobacco were barely pigmented, while those of OE-MaAN2 tobacco were reddish-purple. Moreover, overexpressing MaMybA in tobacco obviously improved anthocyanin pigmentation, compared to the OE-MaAN2 and control plants, by largely upregulating anthocyanin biosynthetic and endogenous bHLH genes. Notably, the increased transcription of NtF3'5'H in OE-MaMybA tobacco might lead to additional accumulation of delphinidin 3-rutinoside, which was barely detected in OE-MaAN2 and control plants. We concluded that the high concentration of anthocyanin and the newly produced Dp3R caused the darker color of OE-MaMybA compared to OE-MaAN2 tobacco.

conclusionThe newly identified R2R3-MYB transcription factor MaMybA functions in anthocyanin biosynthesis, but has some differences from MaAN2; MaMybA could also be useful in modifying flower color in ornamental plants.

Indexed as

Gene Expression Regulation, PlantAmino Acid SequenceAnthocyaninsAsparagaceaeBasic Helix-Loop-Helix ProteinsColorFlowersNicotianaPhylogenyPigments, BiologicalPlant ProteinsPlants, Genetically ModifiedSequence AlignmentTranscription FactorsAnthocyaninsBasic Helix-Loop-Helix ProteinsPigments, BiologicalPlant ProteinsTranscription FactorsAnthocyanin biosynthesisFlower colorMonocot plantsR2R3-MYBTranscription regulationTransgenic tobacco

Identifiers

PMID31500571
PMCPMC6734322
OpenAlexW2972657209

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.