Evidence map›Paper›PMID 31498789›Full record

ArticlePLoS computational biology2019

Prepaid parameter estimation without likelihoods.

Merijn Mestdagh, Stijn Verdonck, Kristof Meers, Tim Loossens, Francis Tuerlinckx

Abstract read
In one paragraph

Article in PLoS computational biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Models of Variability in Probabilistic Causal Judgments.Computational brain & behavior · 2025
    Article
  2. Article
  3. Article
  4. The Bayesian Mutation Sampler Explains Distributions of Causal Judgments.Open mind : discoveries in cognitive science · 2023
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Merijn MestdaghKU Leuven, University of Leuven, Leuven, Belgium.ORCID 0000-0001-5077-861X
Stijn VerdonckKU Leuven, University of Leuven, Leuven, Belgium.ORCID 0000-0002-2199-1072
Kristof MeersKU Leuven, University of Leuven, Leuven, Belgium.ORCID 0000-0002-9610-7712
Tim LoossensKU Leuven, University of Leuven, Leuven, Belgium.ORCID 0000-0002-7587-1922
Francis TuerlinckxKU Leuven, University of Leuven, Leuven, Belgium.ORCID 0000-0002-1775-7654

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In various fields, statistical models of interest are analytically intractable and inference is usually performed using a simulation-based method. However elegant these methods are, they are often painstakingly slow and convergence is difficult to assess. As a result, statistical inference is greatly hampered by computational constraints. However, for a given statistical model, different users, even with different data, are likely to perform similar computations. Computations done by one user are potentially useful for other users with different data sets. We propose a pooling of resources across researchers to capitalize on this. More specifically, we preemptively chart out the entire space of possible model outcomes in a prepaid database. Using advanced interpolation techniques, any individual estimation problem can now be solved on the spot. The prepaid method can easily accommodate different priors as well as constraints on the parameters. We created prepaid databases for three challenging models and demonstrate how they can be distributed through an online parameter estimation service. Our method outperforms state-of-the-art estimation techniques in both speed (with a 23,000 to 100,000-fold speed up) and accuracy, and is able to handle previously quasi inestimable models.

Indexed as

Models, BiologicalModels, StatisticalAlgorithmsComputational BiologyComputer SimulationNonlinear DynamicsStochastic Processes

Identifiers

PMID31498789
PMCPMC6752867

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.