Evidence map›Paper›PMID 31496120›Full record

ArticleMicrobiologyOpen2019

Identification and characterization of OmpT-like proteases in uropathogenic Escherichia coli clinical isolates.

Isabelle Desloges, James A Taylor, Jean-Mathieu Leclerc, John R Brannon, Andrea Portt, John D Spencer, Ken Dewar, Gregory T Marczynski, Amee Manges, Samantha Gruenheid and 2 more

Abstract read
In one paragraph

Article in MicrobiologyOpen, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Proteases in intestinal health and disease.Nature reviews. Gastroenterology & hepatology · 2026
    Review
  3. Article
  4. Article
  5. The role of uropathogenicJournal of medicine and life · 2025
    Review
  6. Article
  7. Third-Generation Cephalosporin-Resistant UropathogenicThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2025
    Article
  8. Unraveling the Resistome, Virulome, and Pathogenicity ofInternational journal of microbiology · 2025
    Article
  9. Article
  10. Article
  11. Review
  12. Protamine cleavage specificity of the avian pathogenFrontiers in veterinary science · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Repurposing HDAC inhibitors to enhance ribonuclease 4 and 7 expression and reduce urinary tract infection.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Isabelle DeslogesDepartment of Microbiology and Immunology, McGill University, Montreal, QC, Canada.
James A TaylorDepartment of Microbiology and Immunology, McGill University, Montreal, QC, Canada.
Jean-Mathieu LeclercDepartment of Microbiology and Immunology, McGill University, Montreal, QC, Canada.
John R BrannonDepartment of Microbiology and Immunology, McGill University, Montreal, QC, Canada.
Andrea PorttDepartment of Microbiology and Immunology, McGill University, Montreal, QC, Canada.ORCID 0000-0002-3393-1448
John D SpencerDivision of Nephrology, Nationwide Children's Hospital, Columbus, Ohio.ORCID 0000-0001-5509-7135
Ken DewarMicrobiome and Disease Tolerance Centre, McGill University, Montreal, QC, Canada.
Gregory T MarczynskiDepartment of Microbiology and Immunology, McGill University, Montreal, QC, Canada.ORCID 0000-0001-8123-3479
Amee MangesSchool of Population and Public Health, University of British Columbia, Vancouver, BC, Canada.ORCID 0000-0003-2462-7249
Samantha GruenheidDepartment of Microbiology and Immunology, McGill University, Montreal, QC, Canada.ORCID 0000-0002-0908-6715
Hervé Le MoualDepartment of Microbiology and Immunology, McGill University, Montreal, QC, Canada.
Jenny-Lee ThomassinDepartment of Microbiology and Immunology, McGill University, Montreal, QC, Canada.ORCID 0000-0003-4226-420X

Funding

The Contributions of Ribonuclease 4 & 7 to Urinary Tract Antibacterial DefenseR01DK115737 · NIDDK · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI John David Spencer · 2018 to 2026
$2.8M
NIDDK NIH HHS R01 DK115737
6 · The paper itself

Abstract

Bacterial colonization of the urogenital tract is limited by innate defenses, including the production of antimicrobial peptides (AMPs). Uropathogenic Escherichia coli (UPEC) resist AMP-killing to cause a range of urinary tract infections (UTIs) including asymptomatic bacteriuria, cystitis, pyelonephritis, and sepsis. UPEC strains have high genomic diversity and encode numerous virulence factors that differentiate them from non-UTI-causing strains, including ompT. As OmpT homologs cleave and inactivate AMPs, we hypothesized that UPEC strains from patients with symptomatic UTIs have high OmpT protease activity. Therefore, we measured OmpT activity in 58 clinical E. coli isolates. While heterogeneous OmpT activities were observed, OmpT activity was significantly greater in UPEC strains isolated from patients with symptomatic infections. Unexpectedly, UPEC strains exhibiting the greatest protease activities harbored an additional ompT-like gene called arlC (ompTp). The presence of two OmpT-like proteases in some UPEC isolates led us to compare the substrate specificities of OmpT-like proteases found in E. coli. While all three cleaved AMPs, cleavage efficiency varied on the basis of AMP size and secondary structure. Our findings suggest the presence of ArlC and OmpT in the same UPEC isolate may confer a fitness advantage by expanding the range of target substrates.

Indexed as

Antimicrobial Cationic PeptidesBacterial Outer Membrane ProteinsEscherichia coli InfectionsEscherichia coli ProteinsHumansHydrolysisPeptide HydrolasesPolymerase Chain ReactionSubstrate SpecificityUrinary Tract InfectionsUropathogenic Escherichia coliVirulence FactorsWhole Genome SequencingAntimicrobial Cationic PeptidesArlC protein, E coliBacterial Outer Membrane ProteinsEscherichia coli ProteinsompT protein, E coliPeptide HydrolasesVirulence Factorsantimicrobial peptidesArlCLL-37OmpPOmpTRNase 7UPEC

Identifiers

PMID31496120
PMCPMC6854850

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.