Evidence map›Paper›PMID 31495573›Full record

ArticleCell2019

Reconstruction of 1,000 Projection Neurons Reveals New Cell Types and Organization of Long-Range Connectivity in the Mouse Brain.

Johan Winnubst, Erhan Bas, Tiago A Ferreira, Zhuhao Wu, Michael N Economo, Patrick Edson, Ben J Arthur, Christopher Bruns, Konrad Rokicki, David Schauder and 20 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 303 papers.

0numbers the graph read from it
0cells of the map it votes in
303citing papers in PubMed
72.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

303 citing papers in PubMed, 552 citations in OpenAlex.

  1. Article
  2. Article
  3. GABAergic subiculum-medial entorhinal projection in mice and rats.Cerebral cortex (New York, N.Y. : 1991) · 2026
    Article
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  15. Primary cilia and neural computation.Journal of biomedical science · 2026
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

243 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 4 institutions in 1 country.

Johan WinnubstJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Erhan BasJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Tiago A FerreiraJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Zhuhao WuLaboratory of Molecular Genetics, The Rockefeller University, New York, NY 10065, USA.
Michael N EconomoJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Patrick EdsonLeap Scientific LLC, Hooksett, NH 03106, USA.
Ben J ArthurJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Christopher BrunsJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Konrad RokickiJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
David SchauderJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Donald J OlbrisJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Sean D MurphyJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
David G AckermanJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Cameron ArshadiJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Perry BaldwinJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Regina BlakeJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Ahmad ElsayedJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Mashtura HasanJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Daniel RamirezJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Bruno Dos SantosJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Monet WeldonJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Amina ZafarJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Joshua T DudmanJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Charles R GerfenIntramural Research Program, National Institute of Mental Health, Bethesda, MD 20892, USA.
Adam W HantmanJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Wyatt KorffJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Scott M SternsonJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Nelson SprustonJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Karel SvobodaJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.
Jayaram ChandrashekarJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA. Electronic address: chandrashekarj@janelia.hhmi.org.
Janelia Research Campus · USHoward Hughes Medical Institute · USNational Institute of Mental Health · USRockefeller University · US

Funding

Collaboratory for atlasing cell type anatomy in the female and male mouse brainU01MH114824 · NIMH · COLD SPRING HARBOR LABORATORY · PI MITRA, PARTHA PRATIM · 2017 to 2021
$11.7M
Howard Hughes Medical Institute.Intramural NIH HHS Z99 MH999999NIMH NIH HHS U01 MH114824
6 · The paper itself

Abstract

Neuronal cell types are the nodes of neural circuits that determine the flow of information within the brain. Neuronal morphology, especially the shape of the axonal arbor, provides an essential descriptor of cell type and reveals how individual neurons route their output across the brain. Despite the importance of morphology, few projection neurons in the mouse brain have been reconstructed in their entirety. Here we present a robust and efficient platform for imaging and reconstructing complete neuronal morphologies, including axonal arbors that span substantial portions of the brain. We used this platform to reconstruct more than 1,000 projection neurons in the motor cortex, thalamus, subiculum, and hypothalamus. Together, the reconstructed neurons constitute more than 85 meters of axonal length and are available in a searchable online database. Axonal shapes revealed previously unknown subtypes of projection neurons and suggest organizational principles of long-range connectivity.

Indexed as

AnimalsBrainFemaleMiceMice, Inbred C57BLMice, TransgenicMicroscopy, Fluorescence, MultiphotonNeuritesPyramidal TractsSoftwareTransfectionautomated reconstructionaxonal morphologylong-range projectionsmorphology databaseneuronal cell typesneuronal connectivityprojection neuronssingle-cell reconstructionwhole brain

Identifiers

PMID31495573
PMCPMC6754285
OpenAlexW2971899185

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.