Evidence map›Paper›PMID 31494245›Full record

ReviewMethods (San Diego, Calif.)2020

High throughput approaches to study RNA-protein interactions in vitro.

Xuan Ye, Eckhard Jankowsky

Abstract readReview
In one paragraph

Review in Methods (San Diego, Calif.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Xuan YeCenter for RNA Science and Therapeutics, School of Medicine, Case Western Reserve University, Cleveland, OH, United States.
Eckhard JankowskyCenter for RNA Science and Therapeutics, School of Medicine, Case Western Reserve University, Cleveland, OH, United States. Electronic address: exj13@case.edu.

Funding

Enzymes and enzyme complexes in RNA metabolismR35GM118088 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI JANKOWSKY, ECKHARD · 2016 to 2022
$4.3M
Ubiquitin and Ubls in KSHVR15GM118011 · NIGMS · TOWSON UNIVERSITY · PI EHRLICH, ELANA S · 2016 to 2016
$354k
NIGMS NIH HHS R15 GM118011NIGMS NIH HHS R35 GM118088
6 · The paper itself

Abstract

To understand the regulation of gene expression it is critical to determine how proteins interact with and discriminate between different RNAs. In this review, we discuss experimental techniques that utilize high throughput approaches to characterize the interactions of proteins with large numbers of RNAs in vitro. We describe the underlying principles for the main methods, briefly discuss their scope and limitations, and outline how insight from the techniques contributes to our understanding of specificity for RNA-protein interactions.

Indexed as

High-Throughput Nucleotide SequencingHigh-Throughput Screening AssaysRNARNA-Binding ProteinsRNARNA-Binding Proteins

Identifiers

PMID31494245
PMCPMC7071787

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.