Evidence map›Paper›PMID 31492943›Full record

ArticleScientific reports2019

In vitro evolution of Pseudomonas aeruginosa AA2 biofilms in the presence of cystic fibrosis lung microbiome members.

Eva Vandeplassche, Andrea Sass, Astrid Lemarcq, Ajai A Dandekar, Tom Coenye, Aurélie Crabbé

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. BioMed research international · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Co-occurring microflora and mucin driveISME communications · 2024
    Article
  10. Article
  11. Review
  12. Adaptation ofMicrobiology (Reading, England) · 2023
    Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. The European respiratory journal · 2022
    Article
  18. The cystic fibrosis lung microenvironment alters antibiotic activity: causes and effects.European respiratory review : an official journal of the European Respiratory Society · 2021
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Eva VandeplasscheLaboratory of Pharmaceutical Microbiology, Ghent University, Ghent, Belgium.
Andrea SassLaboratory of Pharmaceutical Microbiology, Ghent University, Ghent, Belgium.ORCID http://orcid.org/0000-0001-9396-7648
Astrid LemarcqLaboratory of Pharmaceutical Microbiology, Ghent University, Ghent, Belgium.
Ajai A DandekarDepartment of Medicine/Department of Microbiology, University of Washington, Washington, USA.ORCID http://orcid.org/0000-0002-2992-6523
Tom CoenyeLaboratory of Pharmaceutical Microbiology, Ghent University, Ghent, Belgium.ORCID http://orcid.org/0000-0002-6407-0601
Aurélie CrabbéLaboratory of Pharmaceutical Microbiology, Ghent University, Ghent, Belgium. aurelie.crabbe@ugent.be.ORCID http://orcid.org/0000-0003-3084-4418
Ghent University · BEUniversity of Washington · US

Funding

Wellcome TrustWellcome Trust 203141/Z/16/Z
6 · The paper itself

Abstract

In cystic fibrosis (CF) airways, the opportunistic pathogen Pseudomonas aeruginosa evolves from an acute to a chronic infection phenotype. Yet, the in vivo factors influencing the evolutionary trajectory of P. aeruginosa are poorly understood. This study aimed at understanding the role of the CF lung microbiome in P. aeruginosa evolution. Therefore, we investigated the in vitro biofilm evolution of an early CF P. aeruginosa isolate, AA2, in the presence or absence of a synthetic CF lung microbiome. Whole genome sequencing of evolved populations revealed mutations in quorum sensing (QS) genes (lasR, pqsR) with and without the microbiome. Phenotypic assays confirmed decreased production of the QS molecule 3-O-C

Indexed as

4-ButyrolactoneAdaptation, PhysiologicalBacterial ProteinsBiofilmsCystic FibrosisDrug Resistance, BacterialHumansLungMicrobiotaMutationPeptide HydrolasesPhenotypePseudomonas aeruginosaPseudomonas InfectionsPyocyanineQuorum Sensing4-ButyrolactoneBacterial Proteinshomoserine lactonePeptide HydrolasesPyocyanineVirulence Factors

Identifiers

PMID31492943
PMCPMC6731285
OpenAlexW2972160719

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.