Evidence map›Paper›PMID 31492757›Full record

ArticleJournal of cell science2019

Local inhibition of rRNA transcription without nucleolar segregation after targeted ion irradiation of the nucleolus.

Christian Siebenwirth, Christoph Greubel, Guido A Drexler, Judith Reindl, Dietrich W M Walsh, Benjamin Schwarz, Matthias Sammer, Iris Baur, Helmut Pospiech, Thomas E Schmid and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of cell science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The Novel Role of hnRNP UL1 in Human Cell Nucleoli.International journal of biological sciences · 2022
    Article
  5. Article
  6. Review
  7. Article
  8. Article
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  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Christian SiebenwirthBundeswehr Institute of Radiobiology, 80937 Munich, Germany ChristianSiebenwirth@bundeswehr.org.ORCID 0000-0002-5677-8001
Christoph GreubelInstitute for Applied Physics and Metrology, Universität der Bundeswehr München, 85577 Neubiberg, Germany.ORCID 0000-0003-2127-023X
Guido A DrexlerDepartment of Radiation Oncology, University Hospital, Ludwig Maximilians University of Munich, 81377 Munich, Germany.
Judith ReindlInstitute for Applied Physics and Metrology, Universität der Bundeswehr München, 85577 Neubiberg, Germany.
Dietrich W M WalshInstitute for Applied Physics and Metrology, Universität der Bundeswehr München, 85577 Neubiberg, Germany.
Benjamin SchwarzInstitute for Applied Physics and Metrology, Universität der Bundeswehr München, 85577 Neubiberg, Germany.
Matthias SammerInstitute for Applied Physics and Metrology, Universität der Bundeswehr München, 85577 Neubiberg, Germany.
Iris BaurDepartment of Radiation Oncology, University Hospital, Ludwig Maximilians University of Munich, 81377 Munich, Germany.
Helmut PospiechLeibniz Institute for Age Research - Fritz Lipmann Institute (FLI), 07745 Jena, Germany.ORCID 0000-0002-5255-0747
Thomas E SchmidDepartment of Radiation Therapy and Radiooncology, Technical University of Munich, 81675 Munich, Germany.
Günther DollingerInstitute for Applied Physics and Metrology, Universität der Bundeswehr München, 85577 Neubiberg, Germany.
Anna A FriedlDepartment of Radiation Oncology, University Hospital, Ludwig Maximilians University of Munich, 81377 Munich, Germany.
Universität der Bundeswehr München · DELudwig-Maximilians-Universität München · DELeibniz Institute on Aging - Fritz Lipmann Institute (FLI) · DETechnical University of Munich · DEUniversität Ulm · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleoli have attracted interest for their role as cellular stress sensors and as potential targets for cancer treatment. The effect of DNA double-strand breaks (DSBs) in nucleoli on rRNA transcription and nucleolar organisation appears to depend on the agent used to introduce DSBs, DSB frequency and the presence (or not) of DSBs outside the nucleoli. To address the controversy, we targeted nucleoli with carbon ions at the ion microbeam SNAKE. Localized ion irradiation with 1-100 carbon ions per point (about 0.3-30 Gy per nucleus) did not lead to overall reduced ribonucleotide incorporation in the targeted nucleolus or other nucleoli of the same cell. However, both 5-ethynyluridine incorporation and Parp1 protein levels were locally decreased at the damaged nucleolar chromatin regions marked by γH2AX, suggesting localized inhibition of rRNA transcription. This locally restricted transcriptional inhibition was not accompanied by nucleolar segregation, a structural reorganisation observed after inhibition of rRNA transcription by treatment with actinomycin D or UV irradiation. The presented data indicate that even multiple complex DSBs do not lead to a pan-nucleolar response if they affect only a subnucleolar region.

Indexed as

Cell Line, TumorCell NucleolusDNA Breaks, Double-StrandedDNA, RibosomalHumansNucleolus Organizer RegionPol1 Transcription Initiation Complex ProteinsPoly (ADP-Ribose) Polymerase-1RNA, RibosomalTranscription, GeneticDNA, RibosomalPARP1 protein, humanPol1 Transcription Initiation Complex ProteinsPoly (ADP-Ribose) Polymerase-1RNA, Ribosomaltranscription factor UBFDSBIon microbeamNucleolusrRNA transcription

Identifiers

PMID31492757
PMCPMC6803363
OpenAlexW2972234736

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.