ArticleScience (New York, N.Y.)2019
A lineage-resolved molecular atlas of
Open access · bronzeAbstract read
In one paragraph
Article in Science (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 331 papers.
0numbers the graph read from it
0cells of the map it votes in
331citing papers in PubMed
25.6field-weighted citation impact, top 1% of its field
What it found
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Who cites it
331 citing papers in PubMed, 603 citations in OpenAlex.
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- Remote homology and functional genetics unmask deeply preserved Scm3/HJURP orthologs in metazoans.Science advances · 2026Article
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- Assessing the inference of single-cell phylogenies and population dynamics from CRISPR lineage recordings.PLoS computational biology · 2026Article
- Lysosome-related organelles employ divergent mechanisms to modulate cytosolic zinc homeostasis.PLoS genetics · 2026Article
- RECOMBINE identifies recurrent composite markers of cell types and states.Genome research · 2026Article
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271 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
12 authors at 3 institutions in 1 country.
Jonathan S PackerDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.ORCID 0000-0003-4025-0007
Qin ZhuGenomics and Computational Biology Graduate Group, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0001-5539-6071
Chau HuynhDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Priya SivaramakrishnanDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0002-8717-8287
Elicia PrestonDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0001-9209-5956
Hannah DueckDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0002-3324-4357
Derek StefanikDepartment of Biology, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0001-9351-6804
Kai TanDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0002-9104-5567
Cole TrapnellDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.ORCID 0000-0002-8105-4347
Junhyong KimDepartment of Biology, University of Pennsylvania, Philadelphia, PA, USA. junhyong@sas.upenn.edu watersto@uw.edu jmurr@pennmedicine.upenn.edu.ORCID 0000-0002-7726-8246
Robert H WaterstonDepartment of Genome Sciences, University of Washington, Seattle, WA, USA. junhyong@sas.upenn.edu watersto@uw.edu jmurr@pennmedicine.upenn.edu.ORCID 0000-0001-5956-5215
John I MurrayDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA. junhyong@sas.upenn.edu watersto@uw.edu jmurr@pennmedicine.upenn.edu.ORCID 0000-0003-4026-584X
University of Pennsylvania · USUniversity of Washington · USChildren's Hospital of Philadelphia · US
Funding
Resource ProjectU41HG007355 · NHGRI · UNIVERSITY OF WASHINGTON · PI WATERSTON, ROBERT H · 2013 to 2021
$20.8MData Analysis UnitU2CCA233285 · NCI · CHILDREN'S HOSP OF PHILADELPHIA · PI HUNGER, STEPHEN PATRICK, TAN, KAI · 2018 to 2023
$13.2MCenter for Sub-Cellular GenomicsRM1HG010023 · NHGRI · UNIVERSITY OF PENNSYLVANIA · PI EBERWINE, JAMES H, KIM, JUNHYONG · 2018 to 2022
$11.0MAutomated single-cell expression analysis in C. elegansR01GM072675 · NIGMS · UNIVERSITY OF WASHINGTON · PI WATERSTON, ROBERT H · 2005 to 2017
$7.1MPulmonary Macrophage Transplantation for Pulmonary Alveolar ProteinosisR01HL118342 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI TRAPNELL, BRUCE C, TRAPNELL, BRUCE COLSTON · 2014 to 2021
$4.5MCharting the regulatory topography of the cell differentiation landscape with single-cell RNA-Seq.DP2HD088158 · NICHD · UNIVERSITY OF WASHINGTON · PI TRAPNELL, BRUCE COLSTON · 2015 to 2015
$2.3MDecoding lineage and fate specification in the C. elegans embryoR35GM127093 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI MURRAY, JOHN ISAAC · 2018 to 2022
$2.0MSingle cell reconstruction of lineages and variability in C. elegans embryosR21HD085201 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI MURRAY, JOHN ISAAC · 2015 to 2016
$438kNCI NIH HHS U2C CA233285NHGRI NIH HHS RM1 HG010023NHGRI NIH HHS U41 HG007355NHLBI NIH HHS R01 HL118342NICHD NIH HHS DP2 HD088158NICHD NIH HHS R21 HD085201NIGMS NIH HHS R01 GM072675NIGMS NIH HHS R35 GM127093
Abstract
PubMed holds no abstract for this paper.
Indexed as
Cell LineageEmbryonic DevelopmentAnimalsCaenorhabditis elegansCell DifferentiationGene Expression Regulation, DevelopmentalRNA-SeqSingle-Cell AnalysisTranscriptome
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.