Evidence map›Paper›PMID 31488054›Full record

ArticleBMC plant biology2019

Evidence of epistatic suppression of repeat fruiting in cultivated strawberry.

K S Lewers, P Castro, J F Hancock, C K Weebadde, J V Die, L J Rowland

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

K S LewersUSDA-ARS, Genetic Improvement of Fruits and Vegetables Laboratory, Building 010A BARC- West, 10300 Baltimore Ave., Beltsville, MD, 20705-2350, USA. Kim.Lewers@usda.gov.ORCID http://orcid.org/0000-0003-3215-2263
P CastroDepartment of Genetics, Escuela Técnica Superior de Ingenieros Agrónomos, Edificio Gregor Mendel (C-5), Campus de Rabanales, University of Cordoba, 14071, Córdoba, Spain.
J F HancockDepartment of Horticulture, A342C Plant and Soil Sciences Building, Michigan State University, East Lansing, MI, 48824-1325, USA.
C K WeebaddeDepartment of Plant, Soil and Microbial Sciences, A384-D Plant and Soil Sciences Building, Michigan State University, East Lansing, MI, 48824-1325, USA.
J V DieDepartment of Genetics, Escuela Técnica Superior de Ingenieros Agrónomos, Edificio Gregor Mendel (C-5), Campus de Rabanales, University of Cordoba, 14071, Córdoba, Spain.
L J RowlandUSDA-ARS, Genetic Improvement of Fruits and Vegetables Laboratory, Building 010A BARC- West, 10300 Baltimore Ave., Beltsville, MD, 20705-2350, USA.
Michigan State University · USUniversity of Córdoba · ESAgricultural Research Service · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundConsumers purchase fresh strawberries all year long. Extending the fruiting season for new strawberry cultivars is a common breeding goal. Understanding the inheritance of repeat fruiting is key to improving breeding efficiency. Several independent research groups using multiple genotypes and analytic approaches have all identified a single genomic region in strawberry associated with repeat fruiting. Markers mapped to this region were used to evaluate breeding parents from the United States Department of Agriculture - Agricultural Research Service (USDA-ARS) strawberry breeding program at Beltsville, Maryland.

resultsMarkers mapped to repeat fruiting identified once-fruiting genotypes but not repeat-fruiting genotypes. Eleven of twenty-three breeding parents with repeat-fruiting marker profiles were actually once fruiting, indicating at least one additional locus acting epistatically to suppress repeat fruiting. Family segregation ratios could not be predicted reliably by the combined use of parental phenotypes and marker profiles, when using a single-gene model. Expected segregation ratios were calculated for all phenotypic and marker-profile combinations possible from the mapped locus combined with a hypothetical dominant or recessive suppressor locus. Segregation ratios specific to an epistatic suppressor acting on the mapped locus were observed in four families. The segregation ratios for two families were best explained by a dominant suppressor acting on the mapped locus, and, for the other two, by a recessive suppressor. Not all of the observed ratios could be explained by one model or the other, and when multiple families with a common parent were compared, there was no predicted genotype for the common parent that would lead to all of the observed segregation ratios.

conclusionsConsidering all lines of evidence in this study and others, repeat-fruiting in commercial strawberry is controlled primarily by a dominant allele at a single locus, previously mapped by multiple groups. At least two additional genes, one dominant and one recessive, exist that act epistatically to suppress repeat fruiting. Environmental effects and/or incomplete penetrance likely affect phenotype through the suppressor loci, rather than the primary mapped locus. One of the dominant suppressors acts only in the first year, the year the plant is germinated from seed, and not after the plant has experienced a winter.

Indexed as

Epistasis, GeneticPlant BreedingFragariaFruitGenotypePhenotypeDayneutralEverbearingMarker-assisted breedingNon-additivePerpetual floweringRemontant

Identifiers

PMID31488054
PMCPMC6729047
OpenAlexW2972017289

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.