Evidence map›Paper›PMID 3148742›Full record

ArticleJournal of molecular evolution

Domain organization and intron positions in Caenorhabditis elegans collagen genes: the 54-bp module hypothesis revisited.

C Fields

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of molecular evolution. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Cloning and chromosomal location of human alpha 1(XVI) collagen.Proceedings of the National Academy of Sciences of the United States of America · 1992
    Article
  2. Characterization of a fibrillar collagen gene in sponges reveals the early evolutionary appearance of two collagen gene families.Proceedings of the National Academy of Sciences of the United States of America · 1990
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

C FieldsComputing Research Laboratory, New Mexico State University, Las Cruces 88003-0001.
New Mexico State University · US

Funding

STRUCTURE AND EXPRESSION OF EUKARYOTIC GENESR01GM037823 · NIGMS · SYNERGEN, INC. · PI HIRSH, DAVID I · 1986 to 1997
–
NIGMS NIH HHS GM37823
6 · The paper itself

Abstract

The amino acid (aa) sequences of the polypeptides encoded by five collagen genes of the nematode Caenorhabditis elegans, col-6, col-7 (partial), col-8, col-14, and col-19, were determined. These collagen polypeptides, as well as those encoded by the previously sequenced C. elegans collagen genes col-1 and col-2, share a common organization into five domains: an amino-terminal leader, a short (30-33 aa) (Gly-X-Y)n domain, a non(Gly-X-Y) spacer, a long (127-132 aa) (Gly-X-Y)n domain, and a short carboxyl-terminal domain. The domain organizations and intron positions of these polypeptides were compared with those of the polypeptides encoded by Drosophila and Strongylocentrotus type IV, and vertebrate types I, II, III, IV, and IX collagen genes; the C. elegans collagen polypeptides are most similar to the vertebrate type IX collagens. It is suggested that the collagen gene family comprises two divergent subfamilies, one of which includes the vertebrate interstitial collagen genes, and the other of which includes the invertebrate collagen genes and the vertebrate type IV and type IX collagen genes. Only the vertebrate interstitial collagen genes display clear evidence of evolution via the tandem duplication of a 54-bp exon.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCaenorhabditisCollagenDrosophila melanogasterGenesHumansIntronsModels, GeneticMolecular Sequence DataMultigene FamilySea UrchinsSequence Homology, Nucleic AcidVertebratesCollagen

Identifiers

PMID3148742
OpenAlexW2081153695

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.