Evidence map›Paper›PMID 31484938›Full record

ArticleScientific reports2019

Divergent selection and genetic structure of Sideritis scardica populations from southern Balkan Peninsula as revealed by AFLP fingerprinting.

Martina Grdiša, Ivan Radosavljević, Zlatko Liber, Gjoshe Stefkov, Parthenopi Ralli, Paschalina S Chatzopoulou, Klaudija Carović-Stanko, Zlatko Šatović

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. DNA Barcoding and Fertilization Strategies inInternational journal of molecular sciences · 2024
    Article
  3. Plants (Basel, Switzerland) · 2023
    Article
  4. Plants (Basel, Switzerland) · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Population Genetics ofPlants (Basel, Switzerland) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Martina GrdišaUniversity of Zagreb, Faculty of Agriculture, Department of Seed Science and Technology Svetošimunska 25, 10000, Zagreb, Croatia.
Ivan RadosavljevićCentre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska 25, 10000, Zagreb, Croatia. ivan.radosavljevic@biol.pmf.hr.
Zlatko LiberCentre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska 25, 10000, Zagreb, Croatia.
Gjoshe StefkovUniversity Ss. Cyril and Methodius Skopje, Faculty of Pharmacy, Vodnjanska 17, 1000, Skopje, Republic of North Macedonia.
Parthenopi RalliHellenic Agricultural Organization DEMETER, Institute of Breeding and Plant Genetic Resources, Thermi - Thessalonikis, PO Box 60411, 57001, Thessaloniki, Greece.ORCID http://orcid.org/0000-0002-8672-8857
Paschalina S ChatzopoulouHellenic Agricultural Organization DEMETER, Institute of Breeding and Plant Genetic Resources, Thermi - Thessalonikis, PO Box 60411, 57001, Thessaloniki, Greece.
Klaudija Carović-StankoUniversity of Zagreb, Faculty of Agriculture, Department of Seed Science and Technology Svetošimunska 25, 10000, Zagreb, Croatia.
Zlatko ŠatovićUniversity of Zagreb, Faculty of Agriculture, Department of Seed Science and Technology Svetošimunska 25, 10000, Zagreb, Croatia.ORCID http://orcid.org/0000-0002-9848-1601

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sideritis scardica Giseb. is a subalpine/alpine plant species endemic to the central part of the Balkan Peninsula. In this study, we combined Amplified Fragment Length Polymorphism (AFLP) and environmental data to examine the adaptive genetic variations in S. scardica natural populations sampled in contrasting environments. A total of 226 AFLP loci were genotyped in 166 individuals from nine populations. The results demonstrated low gene diversity, ranging from 0.095 to 0.133 and significant genetic differentiation ranging from 0.115 to 0.408. Seven genetic clusters were revealed by Bayesian clustering methods as well as by Discriminant Analysis of Principal Components and each population formed its respective cluster. The exception were populations P02 Mt. Shara and P07 Mt. Vermio, that were admixed between two clusters. Both landscape genetic methods Mcheza and BayeScan identified a total of seven (3.10%) markers exhibiting higher levels of genetic differentiation among populations. The spatial analysis method Samβada detected 50 individual markers (22.12%) associated with bioclimatic variables, among them seven were identified by both Mcheza and BayeScan as being under directional selection. Four bioclimatic variables associated with five out of seven outliers were related to precipitation, suggesting that this variable is the key factor affecting the adaptive variation of S. scardica.

Indexed as

AcclimatizationAmplified Fragment Length Polymorphism AnalysisGenetic LociSelection, GeneticBalkan PeninsulaSideritis

Identifiers

PMID31484938
PMCPMC6726656

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