Evidence map›Paper›PMID 31484765›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Plant evolution and environmental adaptation unveiled by long-read whole-genome sequencing of

Dong An, Yong Zhou, Changsheng Li, Qiao Xiao, Tao Wang, Yating Zhang, Yongrui Wu, Yubin Li, Dai-Yin Chao, Joachim Messing and 1 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed.

  1. Article
  2. Article
  3. Trophic Diversity in Duckweed: Mixotrophy, More Than the Sum of its Extremes.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  4. Review
  5. Article
  6. Article
  7. Duckweed Evolution: from Land back to Water.Genomics, proteomics & bioinformatics · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Chromosome-level genome assembly of Pontederia cordata L. provides insights into its rapid adaptation and variation of flower colours.DNA research : an international journal for rapid publication of reports on genes and genomes · 2025
    Article
  13. Review
  14. Article
  15. Article
  16. The chromosome-level genome of the submerged plant Cryptocoryne crispatula provides insights into the terrestrial-freshwater transition in Araceae.DNA research : an international journal for rapid publication of reports on genes and genomes · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Dong AnSchool of Agriculture and Biology, Shanghai Jiao Tong University, 200240 Shanghai, China.
Yong ZhouSchool of Agriculture and Biology, Shanghai Jiao Tong University, 200240 Shanghai, China.ORCID 0000-0002-1662-9589
Changsheng LiNational Key Laboratory of Plant Molecular Genetics, Chinese Academy of Sciences Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology & Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 200032 Shanghai, China.
Qiao XiaoNational Key Laboratory of Plant Molecular Genetics, Chinese Academy of Sciences Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology & Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 200032 Shanghai, China.
Tao WangNational Key Laboratory of Plant Molecular Genetics, Chinese Academy of Sciences Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology & Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 200032 Shanghai, China.
Yating ZhangSchool of Agriculture and Biology, Shanghai Jiao Tong University, 200240 Shanghai, China.
Yongrui WuNational Key Laboratory of Plant Molecular Genetics, Chinese Academy of Sciences Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology & Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 200032 Shanghai, China.ORCID 0000-0003-3822-0511
Yubin LiBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, 100081 Beijing, China.
Dai-Yin ChaoNational Key Laboratory of Plant Molecular Genetics, Chinese Academy of Sciences Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology & Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 200032 Shanghai, China.
Joachim MessingWaksman Institute of Microbiology, Rutgers University, Piscataway, NJ 08854 messing@waksman.rutgers.edu wang2015@sjtu.edu.cn.ORCID 0000-0001-8260-2643
Wenqin WangSchool of Agriculture and Biology, Shanghai Jiao Tong University, 200240 Shanghai, China; messing@waksman.rutgers.edu wang2015@sjtu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aquatic plants have to adapt to the environments distinct from where land plants grow. A critical aspect of adaptation is the dynamics of sequence repeats, not resolved in older sequencing platforms due to incomplete and fragmented genome assemblies from short reads. Therefore, we used PacBio long-read sequencing of the

Indexed as

Adaptation, PhysiologicalAquatic OrganismsAraceaeDisease ResistanceDNA, PlantEvolution, MolecularGene Expression ProfilingGenome, PlantPlant ProteinsPlant RootsSequence Analysis, DNATandem Repeat SequencesDNA, PlantPlant Proteinsaquatic adaptationdisease resistancelong readsroot evolutiontandem duplication

Identifiers

PMID31484765
PMCPMC6754600

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.