Evidence map›Paper›PMID 31483827›Full record

ArticlePloS one2019

Predicting the future direction of cell movement with convolutional neural networks.

Shori Nishimoto, Yuta Tokuoka, Takahiro G Yamada, Noriko F Hiroi, Akira Funahashi

Abstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Translation of Cellular Protein Localization Using Convolutional Networks.Frontiers in cell and developmental biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shori NishimotoDepartment of Biosciences and Informatics, Keio University, Yokohama-shi, Kanagawa, Japan.
Yuta TokuokaDepartment of Biosciences and Informatics, Keio University, Yokohama-shi, Kanagawa, Japan.
Takahiro G YamadaDepartment of Biosciences and Informatics, Keio University, Yokohama-shi, Kanagawa, Japan.
Noriko F HiroiDepartment of Biosciences and Informatics, Keio University, Yokohama-shi, Kanagawa, Japan.ORCID 0000-0002-0214-373X
Akira FunahashiDepartment of Biosciences and Informatics, Keio University, Yokohama-shi, Kanagawa, Japan.ORCID 0000-0003-0605-239X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Image-based deep learning systems, such as convolutional neural networks (CNNs), have recently been applied to cell classification, producing impressive results; however, application of CNNs has been confined to classification of the current cell state from the image. Here, we focused on cell movement where current and/or past cell shape can influence the future cell movement. We demonstrate that CNNs prospectively predicted the future direction of cell movement with high accuracy from a single image patch of a cell at a certain time. Furthermore, by visualizing the image features that were learned by the CNNs, we could identify morphological features, e.g., the protrusions and trailing edge that have been experimentally reported to determine the direction of cell movement. Our results indicate that CNNs have the potential to predict the future direction of cell movement from current cell shape, and can be used to automatically identify those morphological features that influence future cell movement.

Indexed as

Neural Networks, ComputerAnimalsCell LineCell MovementHumansImage Processing, Computer-AssistedMiceMicroscopyNIH 3T3 CellsTime-Lapse Imaging

Identifiers

PMID31483827
PMCPMC6726366

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.