Evidence map›Paper›PMID 31481674›Full record

ArticleScientific reports2019

Assessing the Protective Metabolome Using Machine Learning in World Trade Center Particulate Exposed Firefighters at Risk for Lung Injury.

George Crowley, Sophia Kwon, Dean F Ostrofsky, Emily A Clementi, Syed Hissam Haider, Erin J Caraher, Rachel Lam, David E St-Jules, Mengling Liu, David J Prezant and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Metabolomics and proteomics in occupational medicine: a comprehensive systematic review.Journal of occupational medicine and toxicology (London, England) · 2024
    Review
  2. Article
  3. Article
  4. Mutagenicity of the organic fraction of World Trade Center dust.Environmental and molecular mutagenesis · 2023
    Article
  5. Article
  6. Review
  7. Dynamic Metabolic Risk Profiling of World Trade Center Lung Disease: A Longitudinal Cohort Study.American journal of respiratory and critical care medicine · 2021
    Article
  8. Article
  9. Observational
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

George CrowleyDepartment of Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, New York University (NYU) School of Medicine, New York, USA.
Sophia KwonDepartment of Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, New York University (NYU) School of Medicine, New York, USA.
Dean F OstrofskyDepartment of Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, New York University (NYU) School of Medicine, New York, USA.
Emily A ClementiDepartment of Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, New York University (NYU) School of Medicine, New York, USA.
Syed Hissam HaiderDepartment of Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, New York University (NYU) School of Medicine, New York, USA.
Erin J CaraherDepartment of Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, New York University (NYU) School of Medicine, New York, USA.
Rachel LamDepartment of Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, New York University (NYU) School of Medicine, New York, USA.
David E St-JulesDepartment of Population Health, Division of Health and Behavior, NYU School of Medicine, NY, New York, NY, USA.
Mengling LiuDepartment of Environmental Medicine, NYU School of Medicine, New York, NY, USA.
David J PrezantBureau of Health Services and Office of Medical Affairs, Fire Department of New York, Brooklyn, NY, USA.
Anna NolanDepartment of Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, New York University (NYU) School of Medicine, New York, USA. anna.nolan@nyumc.org.ORCID http://orcid.org/0000-0002-0631-1171
New York University · USAlbert Einstein College of Medicine · USNew York City Fire Department · US

Funding

Institutional Clinical and Translational Science AwardUL1TR000038 · NCATS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CRONSTEIN, BRUCE NEIL, HOCHMAN, JUDITH S · 2012 to 2014
$16.8M
Metabolomics of World Trade Center-Lung Injury: Biomarker Validation, Longitudinal Assessment and Dietary InterventionU01OH011300 · OH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NOLAN, ANNA · 2017 to 2025
$4.8M
RAGE Mediates LPA Induced Pulmonary InflammationR01HL119326 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NOLAN, ANNA · 2015 to 2019
$2.1M
ACL HHS U01OH011300NCATS NIH HHS UL1 TR000038NHLBI NIH HHS R01 HL119326NIOSH CDC HHS U01 OH011300
6 · The paper itself

Abstract

The metabolome of World Trade Center (WTC) particulate matter (PM) exposure has yet to be fully defined and may yield information that will further define bioactive pathways relevant to lung injury. A subset of Fire Department of New York firefighters demonstrated resistance to subsequent loss of lung function. We intend to characterize the metabolome of never smoking WTC-exposed firefighters, stratified by resistance to WTC-Lung Injury (WTC-LI) to determine metabolite pathways significant in subjects resistant to the loss of lung function. The global serum metabolome was determined in those resistant to WTC-LI and controls (n = 15 in each). Metabolites most important to class separation (top 5% by Random Forest (RF) of 594 qualified metabolites) included elevated amino acid and long-chain fatty acid metabolites, and reduced hexose monophosphate shunt metabolites in the resistant cohort. RF using the refined metabolic profile was able to classify cases and controls with an estimated success rate of 93.3%, and performed similarly upon cross-validation. Agglomerative hierarchical clustering identified potential influential pathways of resistance to the development of WTC-LI. These pathways represent potential therapeutic targets and warrant further research.

Indexed as

Disease ResistanceMetabolomeSeptember 11 Terrorist AttacksAdultAmino AcidsBiomarkersCase-Control StudiesDisease SusceptibilityFatty AcidsFemaleFirefightersForced Expiratory VolumeHumansLungLung InjuryMachine LearningAmino AcidsBiomarkersFatty AcidsParticulate Matter

Identifiers

PMID31481674
PMCPMC6722247
OpenAlexW2971850506

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.