Evidence map›Paper›PMID 31481654›Full record

Observational studyNature communications2019

Extreme inbreeding in a European ancestry sample from the contemporary UK population.

Loic Yengo, Naomi R Wray, Peter M Visscher

Abstract readObservational Study
In one paragraph

Observational study in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Increased homozygosity due to endogamy results in fitness consequences in a human population.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Analysis of genetic dominance in the UK Biobank.Science (New York, N.Y.) · 2023
    Article
  13. Article
  14. Parent-offspring inference in inbred populations.Molecular ecology resources · 2022
    Article
  15. Article
  16. Genomic partitioning of inbreeding depression in humans.American journal of human genetics · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Loic YengoInstitute for Molecular Bioscience, The University of Queensland, QLD 4072, Brisbane, Australia. l.yengodimbou@uq.edu.au.ORCID http://orcid.org/0000-0002-4272-9305
Naomi R WrayInstitute for Molecular Bioscience, The University of Queensland, QLD 4072, Brisbane, Australia.ORCID http://orcid.org/0000-0001-7421-3357
Peter M VisscherInstitute for Molecular Bioscience, The University of Queensland, QLD 4072, Brisbane, Australia. peter.visscher@uq.edu.au.ORCID http://orcid.org/0000-0002-2143-8760

Funding

Medical Research Council MC_PC_17228Medical Research Council MC_QA137853
6 · The paper itself

Abstract

In most human societies, there are taboos and laws banning mating between first- and second-degree relatives, but actual prevalence and effects on health and fitness are poorly quantified. Here, we leverage a large observational study of ~450,000 participants of European ancestry from the UK Biobank (UKB) to quantify extreme inbreeding (EI) and its consequences. We use genotyped SNPs to detect large runs of homozygosity (ROH) and call EI when >10% of an individual's genome comprise ROHs. We estimate a prevalence of EI of ~0.03%, i.e., ~1/3652. EI cases have phenotypic means between 0.3 and 0.7 standard deviation below the population mean for 7 traits, including stature and cognitive ability, consistent with inbreeding depression estimated from individuals with low levels of inbreeding. Our study provides DNA-based quantification of the prevalence of EI in a European ancestry sample from the UK and measures its effects on health and fitness traits.

Indexed as

ConsanguinityHealth StatusFamilyFemaleGenetics, PopulationGenome, HumanHomozygoteHumansMalePhysical FitnessPolymorphism, Single NucleotideUnited KingdomWhite People

Identifiers

PMID31481654
PMCPMC6722066

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.