Evidence map›Paper›PMID 31481626›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Medullary thymic epithelial NF-kB-inducing kinase (NIK)/IKKα pathway shapes autoimmunity and liver and lung homeostasis in mice.

Hong Shen, Yewei Ji, Yi Xiong, Hana Kim, Xiao Zhong, Michelle G Jin, Yatrik M Shah, M Bishr Omary, Yong Liu, Ling Qi and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Runx3 instructs AireJournal of autoimmunity · 2026
    Article
  3. Review
  4. Biliary NF-κB-Inducing Kinase Promotes Ductular Reaction, Inflammation, and Fibrosis and Impedes Liver Disease Resolution.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  5. Article
  6. Review
  7. NF-κB in inflammation and cancer.Cellular & molecular immunology · 2025
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Hong ShenDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109.ORCID 0000-0002-1559-3633
Yewei JiDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109.
Yi XiongDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109.ORCID 0000-0001-5064-4320
Hana KimDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109.
Xiao ZhongDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109.
Michelle G JinDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109.
Yatrik M ShahDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109.
M Bishr OmaryDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109.
Yong LiuCollege of Life Sciences, The Institute for Advanced Studies, Wuhan University, 430072 Wuhan, China.
Ling QiDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109.
Liangyou RuiDepartment of Molecular and Integrative Physiology, University of Michigan Medical School, Ann Arbor, MI 48109; ruily@umich.edu.ORCID 0000-0001-8433-8137
University of Michigan · USWuhan University · CN

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THEODORE S LAWRENCE · 1988 to 2026
$178.2M
PUBLIC HEALTH DEMONSTRATIONP60DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MYERS, MARTIN G · 1985 to 2012
$26.5M
Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Mehboob A Hussain · 2013 to 2026
$24.3M
University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OWYANG, CHUNG · 1986 to 2021
$22.5M
Keratin Biology and Disease Aspects in Simple EpitheliaR01DK047918 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OMARY, BISHR · 1995 to 2018
$6.6M
The role of HIF2alpha in colon carcinogenesisR01CA148828 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SHAH, YATRIK M · 2010 to 2025
$5.2M
The Role of Hypothalamic Slug in the Regulation of Leptin Sensitivity, Energy Balance, and Body WeightR01DK114220 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RUI, LIANGYOU · 2017 to 2024
$4.2M
Role of NF-kB-induce kinase (NIK) in liver diseasesR01DK115646 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RUI, LIANGYOU · 2017 to 2020
$1.7M
The Role of Sel1L and ER Quality Control in AdipocytesR01DK105393 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI QI, LING · 2015 to 2018
$1.4M
Role of brown and beige fat in alcoholic liver diseaseR21AA025945 · NIAAA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RUI, LIANGYOU · 2018 to 2019
$408k
NCI NIH HHS P30 CA046592NCI NIH HHS R01 CA148828NIAAA NIH HHS R21 AA025945NIDDK NIH HHS P30 DK020572NIDDK NIH HHS P30 DK034933NIDDK NIH HHS P60 DK020572NIDDK NIH HHS R01 DK047918NIDDK NIH HHS R01 DK105393NIDDK NIH HHS R01 DK114220NIDDK NIH HHS R01 DK115646
6 · The paper itself

Abstract

Aberrant T cell development is a pivotal risk factor for autoimmune disease; however, the underlying molecular mechanism of T cell overactivation is poorly understood. Here, we identified NF-κB-inducing kinase (NIK) and IkB kinase α (IKKα) in thymic epithelial cells (TECs) as essential regulators of T cell development. Mouse TEC-specific ablation of either NIK or IKKα resulted in severe T cell-mediated inflammation, injury, and fibrosis in the liver and lung, leading to premature death within 18 d of age. NIK or IKKα deficiency abrogated medullary TEC development, and led to breakdown of central tolerance, production of autoreactive T cells, and fatal autoimmune destruction in the liver and lung. TEC-specific ablation of NIK or IKKα also impaired thymic T cell development from the double-negative through the double-positive stages and inhibited peripheral B cell development. These results unravel a hitherto unrecognized essential role of TEC-intrinsic NIK and IKKα pathways in autoimmunity and T cell-instigated chronic liver and lung diseases.

Indexed as

AnimalsAutoimmunityCD4-Positive T-LymphocytesCell DifferentiationEpithelial CellsFemaleHomeostasisI-kappa B KinaseInflammationLiverLungMaleMiceMice, Inbred C57BLMice, KnockoutNF-kappa BChuk protein, mouseI-kappa B KinaseNF-kappa BNF-kappaB-Inducing KinaseProtein Serine-Threonine Kinasesautoimmune diseaseliver diseaselung diseaseNIK and IKKalphathymic epithelial cells

Identifiers

PMID31481626
PMCPMC6754592
OpenAlexW2971525506

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.