Evidence map›Paper›PMID 31481235›Full record

ArticleBiochemical and biophysical research communications2019

Functional significance of the conserved C-Terminal VFVNFA motif in the retina-specific ABC transporter, ABCA4, and its role in inherited visual disease.

Meera J Patel, Subhasis B Biswas, Esther E Biswas-Fiss

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Structural and Pathogenic Impacts ofInternational journal of molecular sciences · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Meera J PatelDepartment of Medical and Molecular Sciences, University of Delaware, College of Health Sciences, Newark, DE 19716, USA. Electronic address: meerapat@udel.edu.
Subhasis B BiswasDepartment of Medical and Molecular Sciences, University of Delaware, College of Health Sciences, Newark, DE 19716, USA. Electronic address: biswassb@udel.edu%26.
Esther E Biswas-FissDepartment of Medical and Molecular Sciences, University of Delaware, College of Health Sciences, Newark, DE 19716, USA. Electronic address: ebiswas@udel.edu.
University of Delaware · US

Funding

MOLECULAR ANALYSIS GENETIC MUTATIONS IN VISUAL DISEASESR15EY013113 · NEI · UNIVERSITY OF DELAWARE · PI BISWAS-FISS, ESTHER ELISSA · 2000 to 2014
$1.1M
NEI NIH HHS R15 EY013113NIH HHS EY013113
6 · The paper itself

Abstract

The human retina-specific ATP binding cassette transporter, ABCA4, plays a significant role in the visual cycle. Mutations in the ABCA4 gene result in a broad spectrum of severe, blinding, retinal degenerative diseases, including Stargardt macular dystrophy, fundus flavimaculatus, autosomal recessive (ar)-retinitis pigmentosa, and ar-cone-rod dystrophy. Genetic testing frequently yields novel variants of unknown significance, making accurate prognosis and therapeutic approaches difficult. Recently, we have reported a novel variant of ABCA4 corresponding to a four-nucleotide deletion which led to a premature stop codon and loss of the last 161 amino acids, including the highly-conserved VFVNFA motif. Despite the presence of this motif among other ABCA proteins, knowledge of the functional significance of this sequence remains limited. In this study, we have conducted structural and functional analyses of recombinant ABCA4 polypeptides with altered VFVNFA motifs to evaluate the importance of this sequence. Further investigation of ABCA4 subdomain interactions, using Fluorescence Resonance Energy Transfer, demonstrated a loss of interaction between nucleotide binding domains in the absence of the VFVNFA motif.

Indexed as

Conserved SequenceAdenosine TriphosphateAmino Acid MotifsAmino Acid SequenceATP-Binding Cassette TransportersGenetic Diseases, InbornHumansHydrolysisKineticsOrgan SpecificityProtein DomainsRetinaStructure-Activity RelationshipVision DisordersABCA4 protein, humanAdenosine TriphosphateATP-Binding Cassette TransportersABCA4ABC transporterFluorescence resonance energy transferMacular degenerationStargardt diseaseVFVNFA motif

Identifiers

PMID31481235
PMCPMC12904561
OpenAlexW2971007858

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.