Evidence map›Paper›PMID 31481072›Full record

ArticleMalaria journal2019

The nuclear 18S ribosomal DNAs of avian haemosporidian parasites.

Josef Harl, Tanja Himmel, Gediminas Valkiūnas, Herbert Weissenböck

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Haemosporidian Parasites of White-Breasted Waterhens (Animals : an open access journal from MDPI · 2023
    Article
  10. Insights into the Biology ofMicroorganisms · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Animals : an open access journal from MDPI · 2021
    Article
  16. Impact of SubclinicalPathogens (Basel, Switzerland) · 2021
    Article
  17. Frontiers in veterinary science · 2021
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Josef HarlDepartment of Pathobiology, Institute of Pathology, University of Veterinary Medicine, Veterinaerplatz 1, 1210, Vienna, Austria.
Tanja HimmelDepartment of Pathobiology, Institute of Pathology, University of Veterinary Medicine, Veterinaerplatz 1, 1210, Vienna, Austria.
Gediminas ValkiūnasNature Research Centre, Vilnius, Lithuania.
Herbert WeissenböckDepartment of Pathobiology, Institute of Pathology, University of Veterinary Medicine, Veterinaerplatz 1, 1210, Vienna, Austria. herbert.weissenboeck@vetmeduni.ac.at.ORCID http://orcid.org/0000-0001-8197-6379
University of Veterinary Medicine Vienna · ATNature Research Centre · LT

Funding

Austrian Science Fund P 29628
6 · The paper itself

Abstract

backgroundPlasmodium species feature only four to eight nuclear ribosomal units on different chromosomes, which are assumed to evolve independently according to a birth-and-death model, in which new variants originate by duplication and others are deleted throughout time. Moreover, distinct ribosomal units were shown to be expressed during different developmental stages in the vertebrate and mosquito hosts. Here, the 18S rDNA sequences of 32 species of avian haemosporidian parasites are reported and compared to those of simian and rodent Plasmodium species.

methodsAlmost the entire 18S rDNAs of avian haemosporidians belonging to the genera Plasmodium (7), Haemoproteus (9), and Leucocytozoon (16) were obtained by PCR, molecular cloning, and sequencing ten clones each. Phylogenetic trees were calculated and sequence patterns were analysed and compared to those of simian and rodent malaria species. A section of the mitochondrial CytB was also sequenced.

resultsSequence patterns in most avian Plasmodium species were similar to those in the mammalian parasites with most species featuring two distinct 18S rDNA sequence clusters. Distinct 18S variants were also found in Haemoproteus tartakovskyi and the three Leucocytozoon species, whereas the other species featured sets of similar haplotypes. The 18S rDNA GC-contents of the Leucocytozoon toddi complex and the subgenus Parahaemoproteus were extremely high with 49.3% and 44.9%, respectively. The 18S sequences of several species from all three genera showed chimeric features, thus indicating recombination.

conclusionGene duplication events leading to two diverged main sequence clusters happened independently in at least six out of seven avian Plasmodium species, thus supporting evolution according to a birth-and-death model like proposed for the ribosomal units of simian and rodent Plasmodium species. Patterns were similar in the 18S rDNAs of the Leucocytozoon toddi complex and Haemoproteus tartakovskyi. However, the 18S rDNAs of the other species seem to evolve in concerted fashion like in most eukaryotes, but the presence of chimeric variants indicates that the ribosomal units rather evolve in a semi-concerted manner. The new data may provide a basis for studies testing whether differential expression of distinct 18S rDNA also occurs in avian Plasmodium species and related haemosporidian parasites.

Indexed as

AnimalsBird DiseasesBirdsCell NucleusDNA, ProtozoanDNA, RibosomalHaemosporidaPhylogenyPlasmodiumRNA, Ribosomal, 18SSpecies SpecificityDNA, ProtozoanDNA, RibosomalRNA, Ribosomal, 18S18S ribosomal RNABirth-and-death evolutionConcerted evolutionHaemoproteusLeucocytozoonPlasmodium

Identifiers

PMID31481072
PMCPMC6724295
OpenAlexW2971944685

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.