Evidence map›Paper›PMID 31479460›Full record

ArticlePloS one2019

Characterization of the complete mitogenome of Anopheles aquasalis, and phylogenetic divergences among Anopheles from diverse geographic zones.

Luis Martinez-Villegas, Juliana Assis-Geraldo, Leonardo B Koerich, Travis C Collier, Yoosook Lee, Bradley J Main, Nilton B Rodrigues, Alessandra S Orfano, Ana C A M Pires, Thais B Campolina and 10 more

Abstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Luis Martinez-VillegasLaboratory of Medical Entomology, Institute René Rachou, Oswaldo Cruz Foundation, Minas Gerais, FIOCRUZ, Belo Horizonte, MG, Brazil.
Juliana Assis-GeraldoBiosystems Informatics and Genomics Group, Institute René Rachou, Oswaldo Cruz Foundation, Minas Gerais, FIOCRUZ, Belo Horizonte, MG, Brazil.
Leonardo B KoerichLaboratory of Physiology of Haematophagous Insects, Federal University of Minas Gerais, Belo Horizonte, MG, Brazil.
Travis C CollierDaniel K. Inouye US Pacific Basin Agricultural Research Center (PBARC), United States Department of Agriculture, Agricultural Research Service, Hilo, Hawaii, United States of America.ORCID 0000-0002-8564-2023
Yoosook LeeVector Genetics Laboratory, Department of Pathology, Microbiology and Immunology, School of Veterinary Medicine, University of California-Davis, Davis, California, United States of America.
Bradley J MainDavis Arbovirus Research and Training, School of Veterinary Medicine, University of California-Davis, Davis, California, United States of America.
Nilton B RodriguesLaboratory of Medical Entomology, Institute René Rachou, Oswaldo Cruz Foundation, Minas Gerais, FIOCRUZ, Belo Horizonte, MG, Brazil.
Alessandra S OrfanoLaboratory of Medical Entomology, Institute René Rachou, Oswaldo Cruz Foundation, Minas Gerais, FIOCRUZ, Belo Horizonte, MG, Brazil.
Ana C A M PiresLaboratory of Medical Entomology, Institute René Rachou, Oswaldo Cruz Foundation, Minas Gerais, FIOCRUZ, Belo Horizonte, MG, Brazil.
Thais B CampolinaLaboratory of Medical Entomology, Institute René Rachou, Oswaldo Cruz Foundation, Minas Gerais, FIOCRUZ, Belo Horizonte, MG, Brazil.
Rafael Nacif-PimentaLaboratory of Medical Entomology, Institute René Rachou, Oswaldo Cruz Foundation, Minas Gerais, FIOCRUZ, Belo Horizonte, MG, Brazil.
Djane C Baia-da-SilvaInstitute of Clinical Research Borborema, Tropical Medicine Foundation Dr. Heitor Vieira Dourado, Manaus, AM, Brazil.
Ana P M DuarteInstitute of Clinical Research Borborema, Tropical Medicine Foundation Dr. Heitor Vieira Dourado, Manaus, AM, Brazil.
Ana C BahiaInstitute of Biophysics Carlos Chagas Filho, Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Claudia M Rios-VelásquezInstitute Leonidas and Maria Deane, Oswaldo Cruz Foundation, FIOCRUZ, Manaus, AM, Brazil.
Marcus V G LacerdaInstitute of Clinical Research Borborema, Tropical Medicine Foundation Dr. Heitor Vieira Dourado, Manaus, AM, Brazil.
Wuelton M MonteiroInstitute of Clinical Research Borborema, Tropical Medicine Foundation Dr. Heitor Vieira Dourado, Manaus, AM, Brazil.
Gregory C LanzaroVector Genetics Laboratory, Department of Pathology, Microbiology and Immunology, School of Veterinary Medicine, University of California-Davis, Davis, California, United States of America.
Nagila F C SecundinoLaboratory of Medical Entomology, Institute René Rachou, Oswaldo Cruz Foundation, Minas Gerais, FIOCRUZ, Belo Horizonte, MG, Brazil.
Paulo F P PimentaLaboratory of Medical Entomology, Institute René Rachou, Oswaldo Cruz Foundation, Minas Gerais, FIOCRUZ, Belo Horizonte, MG, Brazil.ORCID 0000-0002-0158-2482

Funding

Pacific Biosciences PacBio RS Single Molecule Real Time SequencerS10OD018174 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI ROKHSAR, DANIEL SOLEYMAN · 2014 to 2014
$600k
NIH HHS S10 OD018174
6 · The paper itself

Abstract

Whole mitogenome sequences (mtDNA) have been exploited for insect ecology studies, using them as molecular markers to reconstruct phylogenies, or to infer phylogeographic relationships and gene flow. Recent Anopheles phylogenomic studies have provided information regarding the time of deep lineage divergences within the genus. Here we report the complete 15,393 bp mtDNA sequences of Anopheles aquasalis, a Neotropical human malaria vector. When comparing its structure and base composition with other relevant and available anopheline mitogenomes, high similarity and conserved genomic features were observed. Furthermore, 22 mtDNA sequences comprising anopheline and Dipteran sibling species were analyzed to reconstruct phylogenies and estimate dates of divergence between taxa. Phylogenetic analysis using complete mtDNA sequences suggests that A. aquasalis diverged from the Anopheles albitarsis complex ~28 million years ago (MYA), and ~38 MYA from Anopheles darlingi. Bayesian analysis suggests that the most recent ancestor of Nyssorhynchus and Anopheles + Cellia was extant ~83 MYA, corroborating current estimates of ~79-100 MYA. Additional sampling and publication of African, Asian, and North American anopheline mitogenomes would improve the resolution of the Anopheles phylogeny and clarify early continental dispersal routes.

Indexed as

Genome, MitochondrialGenomicsPhylogenyPhylogeographyAnimalsAnophelesBase CompositionComputational BiologyEvolution, MolecularHumansMolecular Sequence AnnotationMosquito VectorsSequence Analysis, DNAWhole Genome Sequencing

Identifiers

PMID31479460
PMCPMC6720026

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.