Evidence map›Paper›PMID 31478834›Full record

ArticleeLife2019

Neighbor predation linked to natural competence fosters the transfer of large genomic regions in

Noémie Matthey, Sandrine Stutzmann, Candice Stoudmann, Nicolas Guex, Christian Iseli, Melanie Blokesch

Abstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Defence systems encoded by core genomic islands of seventh pandemicPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  7. Article
  8. Review
  9. Article
  10. A comparative genomic and phenotypic study ofMicrobiology (Reading, England) · 2024
    Article
  11. mBio · 2024
    Article
  12. Article
  13. A peptide-binding domain shared with an Antarctic bacterium facilitatesProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Sporadic type VI secretion in seventh pandemicMicrobiology (Reading, England) · 2023
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Noémie MattheyLaboratory of Molecular Microbiology, Global Health Institute, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne (Swiss Federal Institute of Technology Lausanne; EPFL), Lausanne, Switzerland.ORCID 0000-0002-6056-2756
Sandrine StutzmannLaboratory of Molecular Microbiology, Global Health Institute, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne (Swiss Federal Institute of Technology Lausanne; EPFL), Lausanne, Switzerland.
Candice StoudmannLaboratory of Molecular Microbiology, Global Health Institute, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne (Swiss Federal Institute of Technology Lausanne; EPFL), Lausanne, Switzerland.
Nicolas GuexSwiss Institute of Bioinformatics, Lausanne, Switzerland.
Christian IseliSwiss Institute of Bioinformatics, Lausanne, Switzerland.ORCID 0000-0002-2296-2863
Melanie BlokeschLaboratory of Molecular Microbiology, Global Health Institute, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne (Swiss Federal Institute of Technology Lausanne; EPFL), Lausanne, Switzerland.ORCID 0000-0002-7024-1489

Funding

H2020 European Research Council 724630-CholeraIndexHoward Hughes Medical Institute 55008726Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 31003A_162551Seventh Framework Programme 309064-VIR4ENVSwiss National Science Foundation 31003A_162551
6 · The paper itself

Abstract

Natural competence for transformation is a primary mode of horizontal gene transfer. Competent bacteria are able to absorb free DNA from their surroundings and exchange this DNA against pieces of their own genome when sufficiently homologous. However, the prevalence of non-degraded DNA with sufficient coding capacity is not well understood. In this context, we previously showed that naturally competent

Indexed as

DNA Transformation CompetenceGene Transfer, HorizontalDNA, BacterialEvolution, MolecularVibrio choleraeDNA, Bacterialinfectious diseasemicrobiologynatural competencetransformationtype VI secretionVibrio cholerae

Identifiers

PMID31478834
PMCPMC6783263

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.