Evidence map›Paper›PMID 31478360›Full record

ArticleMolecular genetics & genomic medicine2019

Inverted duplication, triplication and quintuplication through sequential breakage-fusion-bridge events induced by a terminal deletion at 5p in a case of spontaneous abortion.

Hongyan Chai, Brittany Grommisch, Autumn DiAdamo, Jiadi Wen, Pei Hui, Peining Li

Open access · goldAbstract readCase Reports
In one paragraph

Article in Molecular genetics & genomic medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hongyan ChaiClinical Cytogenetics Laboratory, Department of Genetics, Yale University School of Medicine, New Haven, CT, USA.
Brittany GrommischClinical Cytogenetics Laboratory, Department of Genetics, Yale University School of Medicine, New Haven, CT, USA.
Autumn DiAdamoClinical Cytogenetics Laboratory, Department of Genetics, Yale University School of Medicine, New Haven, CT, USA.
Jiadi WenClinical Cytogenetics Laboratory, Department of Genetics, Yale University School of Medicine, New Haven, CT, USA.
Pei HuiDepartment of Pathology, Yale University School of Medicine, New Haven, CT, USA.
Peining LiClinical Cytogenetics Laboratory, Department of Genetics, Yale University School of Medicine, New Haven, CT, USA.ORCID 0000-0003-4746-4905
Yale University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIntegrated chromosome, fluorescence in situ hybridization (FISH) and array comparative genomic hybridization (aCGH) analyses have been effective in defining unbalanced chromosomal rearrangements. Discordant chromosome and aCGH results are rarely reported.

methodsRoutine cytogenomic analyses and literature review were performed in the study of a case from products of conception (POC).

resultsChromosome and FISH analysis revealed a mosaic pattern consisting of a primary aberration of an inverted duplication of 5p and derived secondary and tertiary aberrations from sequential triplication and quintuplication of 5p, respectively. The aCGH analysis detected only a 1.521 Mb terminal deletion at 5p15.33 with no other pathogenic copy number variants in the genome. This mosaic karyotypic pattern likely resulted from chromosome instability induced by sequential breakage-fusion-bridge events during in vitro cell culture. A review of literature found heterogeneous distal deletion and inverted duplication of 5p in prenatal and pediatric cases.

conclusionThis is the first case reported in POC with a unique mosaic pattern and discordant chromosome and aCGH results. Caution should be applied in reporting and interpreting these discordant results and further analysis for underlying mechanism should be considered.

Indexed as

Chromosome DeletionAbortion, SpontaneousAdultChromosomal InstabilityComparative Genomic HybridizationFemaleHumansIn Situ Hybridization, FluorescenceKaryotypePregnancyReceptors, G-Protein-CoupledReceptors, G-Protein-CoupledTAS2R1 protein, humanbreakage-fusion-bridgeinverted duplicationterminal deletion at 5p

Identifiers

PMID31478360
PMCPMC6785443
OpenAlexW2972042104

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.