Evidence map›Paper›PMID 31475523›Full record

ArticleJournal of the American Chemical Society2019

Structural Origin of the Large Redox-Linked Reorganization in the 2-Oxoglutarate Dependent Oxygenase, TauD.

Christopher W John, Robert P Hausinger, Denis A Proshlyakov

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Impact of Secondary Sphere Hydrogen Bonds on OJournal of the American Chemical Society · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Christopher W JohnDepartment of Chemistry , Michigan State University , East Lansing , Michigan 48824 , United States.ORCID 0000-0003-1713-1229
Robert P HausingerDepartment of Microbiology and Molecular Genetics , Michigan State University , East Lansing , Michigan 48824 , United States.ORCID 0000-0002-3643-2054
Denis A ProshlyakovDepartment of Chemistry , Michigan State University , East Lansing , Michigan 48824 , United States.ORCID 0000-0003-4625-0323
Michigan State University · US

Funding

Study of alpha-ketoglutarate-dependent dioxygenasesR01GM063584 · NIGMS · MICHIGAN STATE UNIVERSITY · PI HAUSINGER, ROBERT P · 2002 to 2014
$3.8M
Transient catalytic oxygen species in iron enzymesR01GM096132 · NIGMS · MICHIGAN STATE UNIVERSITY · PI PROSHLYAKOV, DENIS A · 2011 to 2014
$1.1M
NIGMS NIH HHS R01 GM063584NIGMS NIH HHS R01 GM096132
6 · The paper itself

Abstract

2-Oxoglutarate (2OG)-dependent oxygenases catalyze a wide range of chemical transformations via C-H bond activation. Prior studies raised the question of whether substrate hydroxylation by these enzymes occurs via a hydroxyl rebound or alkoxide mechanism and highlighted the need to understand the thermodynamic properties of transient intermediates. A recent spectroelectrochemical investigation of the 2OG-dependent oxygenase, taurine hydroxylase (TauD), revealed a strong link between the redox potential of the Fe(II)/Fe(III) couple and conformational changes of the enzyme. In this study, we show that the redox potential of wild-type TauD varies by 468 mV between the reduction of 2OG-Fe(III)-TauD (-272 mV) and oxidation of 2OG-Fe(II)-TauD (+196 mV). We use active site variants to investigate the structural origin of the redox-linked reorganization and the contributions of the metal-bound residues to the dynamic tuning of the redox potential of TauD. Time-dependent redox titrations show that reorganization occurs as a multistep process. Transient optical absorption and infrared spectroelectrochemistry show that substitution of any metal ligand alters the kinetics and thermodynamics of the reorganization. The H99A variant shows the largest net redox change relative to the wild-type protein, suggesting that redox-coupled protonation of H99 is required for high redox potentials of the metal. The D101Q and H255Q variants also suppress the conformational change, supporting their involvement in the structural rearrangement. Similar redox-linked conformational changes are observed in another 2OG dependent oxygenase, ethylene-forming enzyme, indicating that dynamic structural flexibility and the associated thermodynamic tuning may be a common phenomenon in this family of enzymes.

Indexed as

Escherichia coliKetoglutaric AcidsMixed Function OxygenasesModels, MolecularMolecular ConformationOxidation-ReductionKetoglutaric AcidsMixed Function Oxygenasestaurine-alpha-ketoglutarate dioxygenase

Identifiers

PMID31475523
PMCPMC7092798
OpenAlexW2971084526

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.