Evidence map›Paper›PMID 31475302›Full record

SynthesisTranslational stroke research2020

Cardioembolic Ischemic Stroke Gene Expression Fingerprint in Blood: a Systematic Review and Verification Analysis.

Teresa García-Berrocoso, Elena Palà, Marta Consegal, Benedetta Piccardi, Alex Negro, Natalia Gill, Anna Penalba, Hector Huerga Encabo, Israel Fernández-Cadenas, Andreas Meisel and 9 more

Registry-linked trialAbstract readSystematic Review
PubMed Publisher
In one paragraph

Synthesis in Translational stroke research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03188484 (Stepwise High Risk Individuals Screening for Atrial Fibrillation Using Sequential Clinical-electro-biological Register), which is not on this map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03188484 completednot on this map

Stepwise High Risk Individuals Screening for Atrial Fibrillation Using Sequential Clinical-electro-biological Register: the AFRICAT Study (Atrial Fibrillation Research In CATalonia)

Typeobservational_patient_registrySponsorFundacio d'Investigacio en Atencio Primaria Jordi Gol i GurinaRan2016 to 2019Enrolled492ConditionsArrhythmia Atrial, Atrial Fibrillation, Hypertension, Diabetes Mellitus
3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 9 institutions in 5 countries.

Teresa García-BerrocosoNeurovascular Research Laboratory, Vall d'Hebron Institute of Research (VHIR), Hospital Vall d'Hebron, Universitat Autònoma de Barcelona, Pg. Vall d'Hebron 119-129, 08035, Barcelona, Spain.
Elena PalàNeurovascular Research Laboratory, Vall d'Hebron Institute of Research (VHIR), Hospital Vall d'Hebron, Universitat Autònoma de Barcelona, Pg. Vall d'Hebron 119-129, 08035, Barcelona, Spain.
Marta ConsegalNeurovascular Research Laboratory, Vall d'Hebron Institute of Research (VHIR), Hospital Vall d'Hebron, Universitat Autònoma de Barcelona, Pg. Vall d'Hebron 119-129, 08035, Barcelona, Spain.
Benedetta PiccardiNeuroscience Section, Department of Neurofarba, University of Florence, Florence, Italy.
Alex NegroNeurovascular Research Laboratory, Vall d'Hebron Institute of Research (VHIR), Hospital Vall d'Hebron, Universitat Autònoma de Barcelona, Pg. Vall d'Hebron 119-129, 08035, Barcelona, Spain.
Natalia GillNeurovascular Research Laboratory, Vall d'Hebron Institute of Research (VHIR), Hospital Vall d'Hebron, Universitat Autònoma de Barcelona, Pg. Vall d'Hebron 119-129, 08035, Barcelona, Spain.
Anna PenalbaNeurovascular Research Laboratory, Vall d'Hebron Institute of Research (VHIR), Hospital Vall d'Hebron, Universitat Autònoma de Barcelona, Pg. Vall d'Hebron 119-129, 08035, Barcelona, Spain.
Hector Huerga EncaboNeurovascular Research Laboratory, Vall d'Hebron Institute of Research (VHIR), Hospital Vall d'Hebron, Universitat Autònoma de Barcelona, Pg. Vall d'Hebron 119-129, 08035, Barcelona, Spain.
Israel Fernández-CadenasNeurovascular Research Laboratory, Vall d'Hebron Institute of Research (VHIR), Hospital Vall d'Hebron, Universitat Autònoma de Barcelona, Pg. Vall d'Hebron 119-129, 08035, Barcelona, Spain.
Andreas MeiselDepartment of Neurology and Center for Stroke Research Berlin, Charité University Hospital Berlin, Berlin, Germany.
Christian MeiselDepartment of Neurology and Center for Stroke Research Berlin, Charité University Hospital Berlin, Berlin, Germany.
Glen C JicklingLawrence J. Ellison Ambulatory Care Center, Department of Neurology, University of California at Davis Medical Center, Sacramento, USA.
Miguel Ángel MuñozInstitut d'Investigació en Atenció Primària IDIAP Jordi Gol, Unitat de Suport a la Recerca de Barcelona, Barcelona, Spain.
Josep Lluis Clúa-EspunyInstitut d'Investigació en Atenció Primària IDIAP Jordi Gol, Unitat de Suport a la Recerca de Barcelona, Barcelona, Spain.
Alonso PedroteDepartment of Cardiology, Hospital Universitario Virgen del Rocio, Seville, Spain.
Jorge PagolaStroke Unit, Department of Neurology, Vall d'Hebron University Hospital, Barcelona, Spain.
Jesús JuegaStroke Unit, Department of Neurology, Vall d'Hebron University Hospital, Barcelona, Spain.
Alejandro BustamanteNeurovascular Research Laboratory, Vall d'Hebron Institute of Research (VHIR), Hospital Vall d'Hebron, Universitat Autònoma de Barcelona, Pg. Vall d'Hebron 119-129, 08035, Barcelona, Spain.
Joan MontanerNeurovascular Research Laboratory, Vall d'Hebron Institute of Research (VHIR), Hospital Vall d'Hebron, Universitat Autònoma de Barcelona, Pg. Vall d'Hebron 119-129, 08035, Barcelona, Spain. joan.montaner@vhir.org.
Universitat Autònoma de Barcelona · ESVall d'Hebron Institut de Recerca · ESCharité - Universitätsmedizin Berlin · DEInstitut Universitari d'Investigació en Atenció Primària Jordi Gol · ESVall d'Hebron Hospital Universitari · ESHospital Universitario Virgen del Rocío · ESHospital Universitario Virgen Macarena · ESUniversity of California Davis Medical Center · USUniversity of Florence · IT

Funding

Fundació la Marató de TV3 201528-30-31-3Instituto de Salud Carlos III PI15/00354Instituto de Salud Carlos III PI18/804Instituto de Salud Carlos III RD16/0019/0021Instituto de Salud Carlos III (ES) JR16/00008
6 · The paper itself

Abstract

An accurate etiological classification is key to optimize secondary prevention after ischemic stroke, but the cause remains undetermined in one third of patients. Several studies pointed out the usefulness of circulating gene expression markers to discriminate cardioembolic (CE) strokes, mainly due to atrial fibrillation (AF), while only exploring them in small cohorts. A systematic review of studies analyzing high-throughput gene expression in blood samples to discriminate CE strokes was performed. Significantly dysregulated genes were considered as candidates, and a selection of them was validated by RT-qPCR in 100 patients with defined CE or atherothrombotic (LAA) stroke etiology. Longitudinal performance was evaluated in 12 patients at three time points. Their usefulness as biomarkers for AF was tested in 120 cryptogenic strokes and 100 individuals at high-risk for stroke. Three published studies plus three unpublished datasets were considered for candidate selection. Sixty-seven genes were found dysregulated in CE strokes. CREM, PELI1, and ZAK were verified to be up-regulated in CE vs LAA (p = 0.010, p = 0.003, p < 0.001, respectively), without changes in their expression within the first 24 h after stroke onset. The combined up-regulation of these three biomarkers increased the probability of suffering from CE stroke by 23-fold. In cryptogenic strokes with subsequent AF detection, PELI1 and CREM showed overexpression (p = 0.017, p = 0.059, respectively), whereas in high-risk asymptomatic populations, all three genes showed potential to detect AF (p = 0.007, p = 0.007, p = 0.015). The proved discriminatory capacity of these gene expression markers to detect cardioembolism even in cryptogenic strokes and asymptomatic high-risk populations might bring up their use as biomarkers.

Indexed as

Gene ExpressionAtrial FibrillationBiomarkersBrain IschemiaEmbolic StrokeHigh-Throughput Nucleotide SequencingHumansBiomarkersAtrial fibrillationBiomarkerCardioembolicEtiologyMicroarraysStroke

Identifiers

PMID31475302
OpenAlexW2971730343

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.