Evidence map›Paper›PMID 31473225›Full record

ArticleGastroenterology2019

Sperm Flagellar 1 Binds Actin in Intestinal Epithelial Cells and Contributes to Formation of Filopodia and Lamellipodia.

Rocio Tapia, Eloy A Perez-Yepez, Maximillian J Carlino, Umesh C Karandikar, Sarah E Kralicek, Mary K Estes, Gail A Hecht

Open access · greenAbstract read
In one paragraph

Article in Gastroenterology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Rocio TapiaDepartment of Medicine, Division of Gastroenterology and Nutrition, Loyola University Chicago, Maywood, Illinois.
Eloy A Perez-YepezDepartment of Medicine, Division of Gastroenterology and Nutrition, Loyola University Chicago, Maywood, Illinois.
Maximillian J CarlinoDepartment of Medicine, Division of Gastroenterology and Nutrition, Loyola University Chicago, Maywood, Illinois.
Umesh C KarandikarDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas.
Sarah E KralicekDepartment of Medicine, Division of Gastroenterology and Nutrition, Loyola University Chicago, Maywood, Illinois.
Mary K EstesDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas; Department of Medicine-Gastroenterology and Hepatology and Infectious Diseases, Baylor College of Medicine, Houston, Texas.
Gail A HechtDepartment of Medicine, Division of Gastroenterology and Nutrition, Loyola University Chicago, Maywood, Illinois; Department of Microbiology and Immunology, Loyola University Chicago, Maywood, Illinois; Edward Hines Jr Veterans Affairs Hospital, Hines, Illinois. Electronic address: ghecht@lumc.edu.
Loyola University Chicago · USBaylor College of Medicine · US

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI James Versalovic · 2001 to 2026
$28.3M
Novel Platforms for Human Intestinal Enteroids: Matrix, Mechanics, and TopographyU19AI116497 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI GRANDE-ALLEN, KATHRYN JANE · 2015 to 2025
$13.2M
Mechanisms of Enteropathogenic E. coli Effects on Polarity and Tight JunctionsR01DK097043 · NIDDK · UNIVERSITY OF ILLINOIS AT CHICAGO · PI HECHT, GAIL A · 2012 to 2016
$1.6M
Mechanisms of Cytoskeletal Regulation of Tight Junction Homeostasis and RepairI01BX002687 · VA · EDWARD HINES JR VA HOSPITAL · PI HECHT, GAIL A · 2016 to 2019
–
BLRD VA I01 BX002687NIAID NIH HHS U19 AI116497NIDDK NIH HHS P30 DK052574NIDDK NIH HHS P30 DK056338NIDDK NIH HHS R01 DK097043
6 · The paper itself

Abstract

BACKGROUND &

aimsSperm flagellar 1 (also called CLAMP) is a microtubule-associated protein that regulates microtubule dynamics and planar cell polarity in multi-ciliated cells. We investigated the localization and function of sperm flagellar 1, or CLAMP, in human intestinal epithelia cells (IECs).

methodsWe performed studies with SKCO-15 and human intestinal enteroids established from biopsies from different intestinal segments (duodenal, jejunum, ileal, and colon) of a single donor. Enteroids were induced to differentiation after incubation with growth factors. The distribution of endogenous CLAMP in IECs was analyzed by immunofluorescence microscopy using total internal reflection fluorescence-ground state depletion and confocal microscopy. CLAMP localization was followed during the course of intestinal epithelial cell polarization as cells progressed from flat to compact, confluent monolayers. Protein interactions with endogenous CLAMP were determined in SKCO-15 cells using proximity ligation assays and co-immunoprecipitation. CLAMP was knocked down in SKCO-15 monolayers using small hairpin RNAs and cells were analyzed by immunoblot and immunofluorescence microscopy. The impact of CLAMP knock-down in migrating SKCO-15 cells was assessed using scratch-wound assays.

resultsCLAMP bound to actin and apical junctional complex proteins but not microtubules in IECs. In silico analysis predicted the calponin-homology domain of CLAMP to contain conserved amino acids required for actin binding. During IEC polarization, CLAMP distribution changed from primarily basal stress fibers and cytoplasm in undifferentiated cells to apical membranes and microvilli in differentiated monolayers. CLAMP accumulated in lamellipodia and filopodia at the leading edge of migrating cells in association with actin. CLAMP knock-down reduced the number of filopodia, perturbed filopodia polarity, and altered the organization of actin filaments within lamellipodia.

conclusionsCLAMP is an actin-binding protein, rather than a microtubule-binding protein, in IECs. CLAMP distribution changes during intestinal epithelial cell polarization, regulates the formation of filopodia, and appears to assist in the organization of actin bundles within lamellipodia of migrating IECs. Studies are needed to define the CLAMP domains that interact with actin and whether its loss from IECs affects intestinal function.

Indexed as

Cell MovementActinsAnimalsCell Line, TumorChlorocebus aethiopsColonCOS CellsEpithelial CellsHumansIntestinal MucosaMicrofilament ProteinsMicrotubulesPseudopodiaActinsMicrofilament ProteinsAJCCytoskeletonMigrationTIRF-GSD

Identifiers

PMID31473225
PMCPMC7016487
OpenAlexW2970103131

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.