Evidence map›Paper›PMID 31472684›Full record

Observational studyJournal of ovarian research2019

Germline and somatic mutations of multi-gene panel in Chinese patients with epithelial ovarian cancer: a prospective cohort study.

Wenhui Li, Di Shao, Lei Li, Ming Wu, Shuiqing Ma, Xianjie Tan, Sen Zhong, Fengming Guo, Zhe Wang, Mingzhi Ye

Registry-linked trialOpen access · goldAbstract readObservational Study
In one paragraph

Observational study in Journal of ovarian research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03015376 (Cohort Study on Characters and Distribution of Inherited Susceptible Genes Among Epithelial Ovarian Cancer Patients and Their Relatives in the North of China), which is not on this map. Cited by 22 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 2 pooled it
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03015376 unknown statusnot on this map

Cohort Study on Characters and Distribution of Inherited Susceptible Genes Among Epithelial Ovarian Cancer Patients and Their Relatives in the North of China

TypeobservationalSponsorPeking Union Medical College HospitalRan2017 to 2019Enrolled1,000ConditionsOvarian Neoplasm Epithelial, Hereditary Breast and Ovarian Cancer Syndrome
3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 2 syntheses or guidelines pooled it, 43 citations in OpenAlex.

  1. Summary ofGenes · 2020
    Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Case Report: Clinical impact ofFrontiers in oncology · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Investigating the suitability ofFrontiers in cell and developmental biology · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Homologous Recombination Deficiencies and Hereditary Tumors.International journal of molecular sciences · 2021
    Review
  17. Article
  18. Observational
  19. Germline and tumorAnnals of translational medicine · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Wenhui LiDepartment of Obstetrics and Gynecology, Peking Union Medical College Hospital, Shuaifuyuan No. 1, Dongcheng District, Beijing, 100730, China.
Di ShaoBGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China.
Lei LiDepartment of Obstetrics and Gynecology, Peking Union Medical College Hospital, Shuaifuyuan No. 1, Dongcheng District, Beijing, 100730, China. lileigh@163.com.ORCID http://orcid.org/0000-0001-8723-3461
Ming WuDepartment of Obstetrics and Gynecology, Peking Union Medical College Hospital, Shuaifuyuan No. 1, Dongcheng District, Beijing, 100730, China. wuming@pumch.cn.
Shuiqing MaDepartment of Obstetrics and Gynecology, Peking Union Medical College Hospital, Shuaifuyuan No. 1, Dongcheng District, Beijing, 100730, China.
Xianjie TanDepartment of Obstetrics and Gynecology, Peking Union Medical College Hospital, Shuaifuyuan No. 1, Dongcheng District, Beijing, 100730, China.
Sen ZhongDepartment of Obstetrics and Gynecology, Peking Union Medical College Hospital, Shuaifuyuan No. 1, Dongcheng District, Beijing, 100730, China.
Fengming GuoBGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China.
Zhe WangBGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China.
Mingzhi YeBGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China.
Chinese Academy of Medical Sciences & Peking Union Medical College · CNBGI Group (China) · CN

Funding

Chinese Academy of Medical Sciences Initiative for Innovative Medicine CAMS-2017-I2M-1-002
6 · The paper itself

Abstract

backgroundMultiple targeted gene sequencing is seldom performed in both germline and somatic testing for ovarian cancer. This study is to evaluate the specific genetic alterations, including both somatic and germline mutations, in Chinese patients with epithelial ovarian cancer (EOC) in a prospective cohort study. MATERIALS AND

methodsMutations in a customed 21-gene panel that included BRCA1, BRCA2, and 19 other tumor suppressor genes related to homologous recombination (HR) deficiency or non-HR deficiency were detected by targeted exon capture and next-generation sequencing (NGS) technology across all coding exons and exon-intron (±20 base pairs) boundaries. Patients were enrolled consecutively and unselectively without age or family history consideration. Sixty-two unselected patients with epithelial ovarian cancer were enrolled in our study to be tested for paired somatic and germline mutations. All patients were tested using a 21-gene panel that included BRCA1, BRCA2, CHEK2, PALB2, BRIP1, TP53, PTEN, STK11, CDH1, ATM, BARD1, MLH1, MRE11A, MSH2, MSH6, MUTYH, NBN, PMS1, PMS2, RAD50, and RAD51C.

resultsMutation analysis revealed that 77.4% (48/62) of patients carried one or more of 64 identified genetic alterations, including 19 germline and 45 somatic deleterious mutations. Twelve individuals shared both germline and somatic mutations. BRCA mutants existed in 17 of 62 (27.4%) patients. Of the 64 mutations detected, 46 (74.2%) were in 7 other HR or non-HR genes, including TP53, PTEN, ATM, CHEK2, PALB2, RAD51C, and STK11. In somatic mutation analysis, TP53 showed frequent pathogenic or likely pathogenic mutations in 56.5% (35/62) of enrolled cases, among which six cases harbored a loss of heterozygosity.

conclusionsThis is the first report of multi-gene panel testing for germline and somatic mutations among Chinese EOC patients, which revealed a broader deleterious variants than only BRCA testing. REGISTRATION: Registration No. NCT03015376, clinicaltrials.gov , registered on January 10, 2017.

Indexed as

AdultAgedAsian PeopleCarcinoma, Ovarian EpithelialChinaFemaleHumansMiddle AgedMutationOvarian NeoplasmsProspective StudiesTumor Suppressor ProteinsTumor Suppressor ProteinsEpithelial ovarian cancerGermline mutationHomologous recombination deficiencyNext-generation sequencingSomatic mutation

Identifiers

PMID31472684
PMCPMC6717355
OpenAlexW2971096871

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.