ArticleiScience2019
Sequencing Technologies and Analyses: Where Have We Been and Where Are We Going?
Article in iScience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
24 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Research evolution of flat peach (Frontiers in plant science · 2025Pooled it
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- Advances in Functional Genomics for Exploring Abiotic Stress Tolerance Mechanisms in Cereals.Plants (Basel, Switzerland) · 2025Review
- Genomics in Pancreas-Kidney Transplantation: From Risk Stratification to Personalized Medicine.Genes · 2025Review
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- Pathogenesis of Focal Segmental Glomerulosclerosis and Related Disorders.Annual review of pathology · 2025Review
- High-resolution genetic map and SNP chip for molecular breeding inHorticulture research · 2024Article
- Improving rigor and reproducibility in chromatin immunoprecipitation assay data analysis workflows with Rocketchip.bioRxiv : the preprint server for biology · 2024Article
- Alternative genome sequencing approaches of SARS-CoV-2 using Ion AmpliSeq Technology.MethodsX · 2024Article
- Modeling methamphetamine use disorder and relapse in animals: short- and long-term epigenetic, transcriptional., and biochemical consequences in the rat brain.Neuroscience and biobehavioral reviews · 2023Review
- Article
- DrSim: Similarity Learning for Transcriptional Phenotypic Drug Discovery.Genomics, proteomics & bioinformatics · 2022Article
- RResolver: efficient short-read repeat resolution within ABySS.BMC bioinformatics · 2022Article
- Evaluation of Genetic Kidney Diseases in Living Donor Kidney Transplantation: Towards Precision Genomic Medicine in Donor Risk Assessment.Current transplantation reports · 2022Article
- Characterization of Atypical Shiga Toxin Gene Sequences and Description of Stx2j, a New Subtype.Journal of clinical microbiology · 2022Article
- Forest and Trees: Exploring Bacterial Virulence with Genome-wide Association Studies and Machine Learning.Trends in microbiology · 2021Review
- Review
- Tutorial: assessing metagenomics software with the CAMI benchmarking toolkit.Nature protocols · 2021Review
- Deep Learning for Integrated Analysis of Insulin Resistance with Multi-Omics Data.Journal of personalized medicine · 2021Article
- Development of 50 InDel-based barcode system for genetic identification of tartary buckwheat resources.PloS one · 2021Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors.
Funding
Abstract
A wave of technologies transformed sequencing over a decade ago into the high-throughput era, demanding research in new computational methods to analyze these data. The applications of these sequencing technologies have continuously expanded since then. The RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-Seq) meeting, established in 2011, brings together leading researchers in computational genomics and genomic biology to discuss emerging frontiers in algorithm development for massively parallel sequencing data. The ninth edition of this workshop was held in Washington, DC, in George Washington University on May 3 and 4, 2019. There was an exploration of several traditional topics in sequence analysis, including genome assembly, sequence alignment, and data compression, and development of methods for new sequencing technologies, including linked reads and single-molecule long-read sequencing. Here we revisit these topics and discuss the current status and perspectives of sequencing technologies and analyses.
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.