Evidence map›Paper›PMID 31471544›Full record

ArticleScientific reports2019

Newly developed Laboratory-based Size exclusion chromatography Small-angle x-ray scattering System (La-SSS).

Rintaro Inoue, Tatsuo Nakagawa, Ken Morishima, Nobuhiro Sato, Aya Okuda, Reiko Urade, Rina Yogo, Saeko Yanaka, Maho Yagi-Utsumi, Koichi Kato and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

  1. Upgrade of the KWS-2 high-intensity/extended-Journal of applied crystallography · 2025
    Article
  2. Article
  3. Article
  4. Adaptable SEC-SAXS data collection for higher quality structure analysis in solution.Protein science : a publication of the Protein Society · 2024
    Article
  5. Article
  6. Upgraded D22 SEC-SANS setup dedicated to the biology community.Journal of applied crystallography · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Journal of applied crystallography · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Rintaro InoueInstitute for Integrated Radiation and Nuclear Science, Kyoto University, Kumatori, Sennan-gun, Osaka, 590-0494, Japan. rintaro@rri.kyoto-u.ac.jp.
Tatsuo NakagawaUnisoku Co. Ltd., 3-4-2 Kasugano, Hirakata City, Osaka, 573-0131, Japan.
Ken MorishimaInstitute for Integrated Radiation and Nuclear Science, Kyoto University, Kumatori, Sennan-gun, Osaka, 590-0494, Japan.
Nobuhiro SatoInstitute for Integrated Radiation and Nuclear Science, Kyoto University, Kumatori, Sennan-gun, Osaka, 590-0494, Japan.
Aya OkudaInstitute for Integrated Radiation and Nuclear Science, Kyoto University, Kumatori, Sennan-gun, Osaka, 590-0494, Japan.
Reiko UradeInstitute for Integrated Radiation and Nuclear Science, Kyoto University, Kumatori, Sennan-gun, Osaka, 590-0494, Japan.
Rina YogoExploratory Research Center on Life and Living Systems (ExCELLS) and Institute for Molecular Science (IMS), National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, 444-8787, Japan.ORCID http://orcid.org/0000-0002-1595-0194
Saeko YanakaExploratory Research Center on Life and Living Systems (ExCELLS) and Institute for Molecular Science (IMS), National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, 444-8787, Japan.ORCID http://orcid.org/0000-0002-3513-5701
Maho Yagi-UtsumiExploratory Research Center on Life and Living Systems (ExCELLS) and Institute for Molecular Science (IMS), National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, 444-8787, Japan.ORCID http://orcid.org/0000-0001-8144-740X
Koichi KatoExploratory Research Center on Life and Living Systems (ExCELLS) and Institute for Molecular Science (IMS), National Institutes of Natural Sciences, 5-1 Higashiyama, Myodaiji, Okazaki, 444-8787, Japan.ORCID http://orcid.org/0000-0001-7187-9612
Kazuki OmotoRigaku Corp. 12-9-3 Matsubara, Akishima City, Tokyo, 196-8666, Japan.ORCID http://orcid.org/0000-0002-8080-0926
Kazuki ItoRigaku Corp. 12-9-3 Matsubara, Akishima City, Tokyo, 196-8666, Japan.ORCID http://orcid.org/0000-0002-8550-6937
Masaaki SugiyamaInstitute for Integrated Radiation and Nuclear Science, Kyoto University, Kumatori, Sennan-gun, Osaka, 590-0494, Japan. sugiyama@rri.kyoto-u.ac.jp.
Kyoto University · JPNational Institutes of Natural Sciences · JPRigaku (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To understand a biological system, it is important to observe structures of biomolecules in the solution where the system is functionalized. Small-Angle X-ray Scattering coupled with Size Exclusion Chromatography (SEC-SAXS) is one of techniques to selectively observe the target molecules in the multi-component system. However, this technique is believed to be available only with a synchrotron-based SAXS instrument due to requirement of high beam intensity and, therefore, the limitation of the beam time was obstacle to satisfy demands from many bio-researchers. We newly developed Laboratory-based Size exclusion chromatography SAXS System (La-SSS) by utilizing a latest laboratory-based SAXS instrument and finely optimization of the balance between flow rate, cell volume, irradiation time and so on. La-SSS succeeded not only decoupling of target protein(s) from non-specific aggregates but also measurement of each concerned component in a multi-component system. In addition, an option: "stopping mode", which is designed for improving statistics of SAXS profile, realized a high S/N data acquisition for the most interesting protein in a multi-component system. Furthermore, by utilizing a column having small bed volume, the small-scale SEC-SAXS study makes available. Through optimization of instrumental parameters and environments, La-SSS is highly applicable for experimental requirements from various biological samples. It is strongly expected that a La-SSS concept must be a normal option for laboratory-based SAXS in the near future.

Identifiers

PMID31471544
PMCPMC6717197
OpenAlexW2970002277

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.