Evidence map›Paper›PMID 31471129›Full record

ArticleStructure (London, England : 1993)2019

Conformational Changes in HIV-1 Reverse Transcriptase that Facilitate Its Maturation.

Ryan L Slack, Tatiana V Ilina, Zhaoyong Xi, Nicholas S Giacobbi, Gota Kawai, Michael A Parniak, Stefan G Sarafianos, Nicolas Sluis Cremer, Rieko Ishima

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Ryan L SlackDepartment of Structural Biology, University of Pittsburgh School of Medicine, Room 1037, Biomedical Science Tower 3, 3501 Fifth Avenue, Pittsburgh, PA 15260, USA.
Tatiana V IlinaDepartment of Structural Biology, University of Pittsburgh School of Medicine, Room 1037, Biomedical Science Tower 3, 3501 Fifth Avenue, Pittsburgh, PA 15260, USA.
Zhaoyong XiDepartment of Structural Biology, University of Pittsburgh School of Medicine, Room 1037, Biomedical Science Tower 3, 3501 Fifth Avenue, Pittsburgh, PA 15260, USA.
Nicholas S GiacobbiDepartment of Medicine, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Gota KawaiDepartment of Life and Environmental Sciences, Chiba Institute of Technology, Chiba, Japan.
Michael A ParniakDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, PA 15219, USA.
Stefan G SarafianosLaboratory of Biochemical Pharmacology, Department of Pediatrics, Emory University School of Medicine, Atlanta, GA 30322, USA.
Nicolas Sluis CremerDepartment of Medicine, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA. Electronic address: nps2@pitt.edu.
Rieko IshimaDepartment of Structural Biology, University of Pittsburgh School of Medicine, Room 1037, Biomedical Science Tower 3, 3501 Fifth Avenue, Pittsburgh, PA 15260, USA. Electronic address: ishima@pitt.edu.
University of Pittsburgh · USChiba Institute of Technology · JPEmory University · US

Funding

X-Ray Core P50GM082251 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ENGELMAN, ALAN N. · 2007 to 2018
$48.1M
X-ray Crystallographic Fragment Screening CoreU54AI150472 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI SARAFIANOS, STEFAN G, TORBETT, BRUCE EDWARD · 2019 to 2021
$15.7M
Technology Development 2: MAS NMR and dynamic nuclear polarization for HIV-1 structural biologyP50AI150481 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GRONENBORN, ANGELA M. · 2019 to 2021
$14.1M
Tracking the evolution of drug resistance for highly potent HIV protease inhibitoP01GM109767 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI SHERMAN, BRIAN WOODY · 2014 to 2018
$8.0M
NNRTI induced conformational changes in HIV-1 RT - Equipment SupplementR01GM068406 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SLUIS-CREMER, NICOLAS PAUL · 2003 to 2017
$3.7M
Reverse Transcriptase Multi-Class Drug Resistance and Rilpivirine Susceptibility in Diverse HIV-1 SubtypesR01GM118012 · NIGMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI SARAFIANOS, STEFAN G · 2016 to 2019
$1.6M
Conformational Dynamics and inhibitor responses of HIV-1 RT RNase H in solutionR01GM105401 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ISHIMA, RIEKO · 2013 to 2016
$1.4M
Acylhydrazone inhibitors of HIV-1 ribonuclease HR01AI077424 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ISHIMA, RIEKO, PARNIAK, MICHAEL A · 2009 to 2010
$749k
NIAID NIH HHS P50 AI150481NIAID NIH HHS R01 AI077424NIAID NIH HHS U54 AI150472NIGMS NIH HHS P01 GM109767NIGMS NIH HHS P50 GM082251NIGMS NIH HHS R01 GM068406NIGMS NIH HHS R01 GM105401NIGMS NIH HHS R01 GM118012
6 · The paper itself

Abstract

HIV-1 reverse transcriptase (RT) is translated as part of the Gag-Pol polyprotein that is proteolytically processed by HIV-1 protease (PR) to finally become a mature heterodimer, composed of a p66 and a p66-derived 51-kDa subunit, p51. Our previous work suggested that tRNA

Indexed as

HIV-1HIV ProteaseHIV Reverse TranscriptaseModels, MolecularNuclear Magnetic Resonance, BiomolecularProtein ConformationProtein MultimerizationProteolysisRNA, Transfer, LysHIV ProteaseHIV Reverse Transcriptasereverse transcriptase, Human immunodeficiency virus 1RNA, Transfer, LysHIV-1maturationNMRreverse transcriptasestructure

Identifiers

PMID31471129
PMCPMC6774901
OpenAlexW2970947984

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.