Evidence map›Paper›PMID 31469856›Full record

ArticlePloS one2019

Prevalence of resistance associated substitutions and efficacy of baseline resistance-guided chronic hepatitis C treatment in Spain from the GEHEP-004 cohort.

Ana Belén Pérez, Natalia Chueca, Juan Macías, Juan Antonio Pineda, Javier Salmerón, Antonio Rivero-Juárez, Carmen Hidalgo-Tenorio, María Dolores Espinosa, Francisco Téllez, Miguel Ángel Von-Wichmann and 21 more

Abstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

Ana Belén PérezClinical Microbiology Unit, University Hospital Reina Sofía, Instituto Maimónides de Investigación Biomédica de Córdoba (IMIBIC), Córdoba, Spain.ORCID 0000-0001-9655-817X
Natalia ChuecaClinical Microbiology Unit, University Hospital San Cecilio, Instituto de Investigacion Ibs. Granada, Granada, Spain.
Juan MacíasInfectious Diseases Unit, University Hospital Nuestra Señora de Valme, Sevilla, Spain.ORCID 0000-0002-4778-790X
Juan Antonio PinedaInfectious Diseases Unit, University Hospital Nuestra Señora de Valme, Sevilla, Spain.
Javier SalmerónHepatology Unit, University Hospital San Cecilio Granada, Instituto de Investigación Ibs. CIBERehd, Granada, Spain.
Antonio Rivero-JuárezInfectious Diseases Unit, University Hospital Reina Sofía, Instituto Maimónides de Investigación Biomédica de Córdoba (IMIBIC), Universidad de Córdoba, Córdoba, Spain.
Carmen Hidalgo-TenorioInfectious Diseases Unit, University Hospital Virgen de las Nieves, Granada, Spain.
María Dolores EspinosaHepatology Unit, University Hospital Virgen de las Nieves, Granada, Spain.
Francisco TéllezInfectious Diseases Unit, Hospital Puerto Real, Puerto Real, Cádiz, Spain.ORCID 0000-0002-9997-6761
Miguel Ángel Von-WichmannInfectious Diseases Unit, University Hospital Donostia, San Sebastián, Spain.
Mohamed OmarInfectious Diseases Unit, Complejo Hospitalario de Jaén, Jáen, Spain.
Jesús SantosInfectious Diseases Unit, University Hospital Virgen de la Victoria, Málaga, Spain.
José Hernández-QueroInfectious Diseases Unit, University Hospital San Cecilio, Granada, Spain.
José Joaquin AntónPenitenciary Physician, Albolote Penitenciary, Albolote, Granada, Spain.
Antonio ColladoInfectious Diseases Unit, Complejo Hospitalario Torrecárdenas, Almería, Spain.
Ana Belén LozanoInfectious Diseases Unit, Hospital de Poniente, El Ejido, Almería, Spain.
Miguel García-DeltoroInfectious Diseases Unit, Hospital General de Valencia, Valencia, Spain.
Marta CasadoHepatology Unit, Complejo Hospitalario Torrecárdenas, Almería, Spain.
Juan Manuel PascasioHepatology Unit, University Hospital Virgen del Rocío, Seville, Spain.
Aida SelfaHepatology Unit, Hospital Comarcal Santa Ana, Motril Granada, Spain.
José Miguel RosalesHepatology Unit, Hospital Costa del Sol, Marbella, Málaga, Spain.
Alberto De la IglesiaClinical Microbiology Unit, University Hospital Infanta Elena, Huelva, Spain.
Juan Ignacio ArenasHepatology Unit, University Hospital Donostia, San Sebastián, Spain.
Silvia García-BujalanceClinical Microbiology Unit, University Hospital La Paz, Madrid, Spain.
María José RíosInfectious Diseases Unit, University Hospital Virgen Macarena, Seville, Spain.
Enrique BernalInfectious Diseases Unit, Hospital General Reina Sofía, Murcia, Spain.
Onofre MartínezInfectious Diseases Unit, University Hospital Santa Lucía, Cartagena, Spain.
Antonio García-HerolaHepatology Unit, Hospital Marina Baixa, Vilajoyosa, Alicante, Spain.
Mónica VélezInfectious Diseases Unit, Hospital General de La Palma, La Palma, Spain.
Pilar RincónInfectious Diseases Unit, University Hospital Nuestra Señora de Valme, Sevilla, Spain.
Federico GarcíaClinical Microbiology Unit, University Hospital San Cecilio, Instituto de Investigacion Ibs. Granada, Granada, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Treatment guidelines differ in their recommendation to determine baseline resistance associated substitutions (RAS) before starting a first-line treatment with direct-acting antivirals (DAAs). Here we analyze the efficacy of DAA treatment with baseline RAS information. We conducted a prospective study involving 23 centers collaborating in the GEHEP-004 DAA resistance cohort. Baseline NS5A and NS3 RASs were studied by Sanger sequencing. After issuing a comprehensive resistance report, the treating physician decided the therapy, duration and ribavirin use. Sustained virological response (SVR12) data are available in 275 patients. Baseline NS5A RAS prevalence was between 4.3% and 26.8% according to genotype, and NS3 RASs prevalence (GT1a) was 6.3%. Overall, SVR12 was 97.8%. Amongst HCV-GT1a patients, 75.0% had >800,000 IU/ml and most of those that started grazoprevir/elbasvir were treated for 12 weeks. In genotype 3, NS5A Y93H was detected in 9 patients. 42.8% of the HCV-GT3 patients that started sofosbuvir/velpatasvir included ribavirin, although only 14.7% carried Y93H. The efficacy of baseline resistance-guided treatment in our cohort has been high across the most prevalent HCV genotypes in Spain. The duration of the grazoprevir/elbasvir treatment adhered mostly to AASLD/IDSA recommendations. In cirrhotic patients infected with GT-3 there has been a high use of ribavirin.

Indexed as

AmidesAntiviral AgentsBenzofuransCarbamatesCyclopropanesDEAD-box RNA HelicasesDrug Resistance, ViralFemaleGenotypeHepacivirusHepatitis C, ChronicHumansImidazolesLactams, MacrocyclicMaleMiddle AgedAmidesAntiviral AgentsBenzofuransCarbamatesCyclopropanesDEAD-box RNA HelicaseselbasvirgrazoprevirImidazolesLactams, MacrocyclicNS3 protein, hepatitis C virusNS-5 protein, hepatitis C virusNucleoside-TriphosphataseQuinoxalinesRibavirinRNA-Dependent RNA PolymeraseSerine EndopeptidasesSofosbuvirSulfonamidesViral Nonstructural ProteinsViral Proteases

Identifiers

PMID31469856
PMCPMC6716636

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.