Evidence map›Paper›PMID 31469822›Full record

ArticlePLoS computational biology2019

Mechanical properties of tubulin intra- and inter-dimer interfaces and their implications for microtubule dynamic instability.

Vladimir A Fedorov, Philipp S Orekhov, Ekaterina G Kholina, Artem A Zhmurov, Fazoil I Ataullakhanov, Ilya B Kovalenko, Nikita B Gudimchuk

Abstract read
In one paragraph

Article in PLoS computational biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. Mechanisms of microtubule dynamics from single-molecule measurements.bioRxiv : the preprint server for biology · 2025
    Article
  4. Microtubule dynamics are defined by conformations and stability of clustered protofilaments.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Beyond the GTP-cap: Elucidating the molecular mechanisms of microtubule catastrophe.BioEssays : news and reviews in molecular, cellular and developmental biology · 2023
    Article
  14. Article
  15. Review
  16. Bending-torsional elasticity and energetics of the plus-end microtubule tip.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  17. H-ABC- and dystonia-causingScience advances · 2022
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Vladimir A FedorovDepartment of Biology, Lomonosov Moscow State University, Moscow, Russia.ORCID 0000-0002-9397-1548
Philipp S OrekhovDepartment of Biology, Lomonosov Moscow State University, Moscow, Russia.ORCID 0000-0003-4078-4762
Ekaterina G KholinaDepartment of Biology, Lomonosov Moscow State University, Moscow, Russia.
Artem A ZhmurovMoscow Institute of Physics and Technology, Dolgoprudny, Russia.
Fazoil I AtaullakhanovMoscow Institute of Physics and Technology, Dolgoprudny, Russia.
Ilya B KovalenkoDepartment of Biology, Lomonosov Moscow State University, Moscow, Russia.ORCID 0000-0002-4949-6591
Nikita B GudimchukDepartment of Physics, Lomonosov Moscow State University, Moscow, Russia.ORCID 0000-0002-7283-8959

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thirteen tubulin protofilaments, made of αβ-tubulin heterodimers, interact laterally to produce cytoskeletal microtubules. Microtubules exhibit the striking property of dynamic instability, manifested in their intermittent growth and shrinkage at both ends. This behavior is key to many cellular processes, such as cell division, migration, maintenance of cell shape, etc. Although assembly and disassembly of microtubules is known to be linked to hydrolysis of a guanosine triphosphate molecule in the pocket of β-tubulin, detailed mechanistic understanding of corresponding conformational changes is still lacking. Here we take advantage of the recent generation of in-microtubule structures of tubulin to examine the properties of protofilaments, which serve as important microtubule assembly and disassembly intermediates. We find that initially straight tubulin protofilaments, relax to similar non-radially curved and slightly twisted conformations. Our analysis further suggests that guanosine triphosphate hydrolysis primarily affects the flexibility and conformation of the inter-dimer interface, without a strong impact on the shape or flexibility of αβ-heterodimer. Inter-dimer interfaces are significantly more flexible compared to intra-dimer interfaces. We argue that such a difference in flexibility could be key for distinct stability of the plus and minus microtubule ends. The higher flexibility of the inter-dimer interface may have implications for development of pulling force by curving tubulin protofilaments during microtubule disassembly, a process of major importance for chromosome motions in mitosis.

Indexed as

Biomechanical PhenomenaComputational BiologyCryoelectron MicroscopyGuanosine DiphosphateGuanosine TriphosphateHydrolysisMicrotubulesModels, MolecularMolecular Dynamics SimulationPrincipal Component AnalysisProtein ConformationProtein Interaction Domains and MotifsProtein MultimerizationProtein StabilityProtein Structure, QuaternaryTubulinGuanosine DiphosphateGuanosine TriphosphateTubulin

Identifiers

PMID31469822
PMCPMC6742422

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.