Evidence map›Paper›PMID 31469434›Full record

ArticleInternational journal of cancer2020

Systematic comparison of plasma EBV DNA, anti-EBV antibodies and miRNA levels for early detection and prognosis of nasopharyngeal carcinoma.

Lu Ping Tan, Geok Wee Tan, Vijaya Mohan Sivanesan, Siang Ling Goh, Xun Jin Ng, Chun Shen Lim, Wee Ric Kim, Taznim Begam Binti Mohd Mohidin, Nor Soleha Mohd Dali, Siew Hoon Ong and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in International journal of cancer, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it, 93 citations in OpenAlex.

  1. Pooled it
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  9. Targeted photodynamic elimination of HER2Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2025
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  12. IncreasedThe Journal of international medical research · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 3 countries.

Lu Ping TanMolecular Pathology Unit, Cancer Research Centre, Institute for Medical Research, Ministry of Health Malaysia, Kuala Lumpur, Malaysia.ORCID 0000-0002-7934-2462
Geok Wee TanMolecular Pathology Unit, Cancer Research Centre, Institute for Medical Research, Ministry of Health Malaysia, Kuala Lumpur, Malaysia.ORCID 0000-0003-3872-3485
Vijaya Mohan SivanesanMolecular Pathology Unit, Cancer Research Centre, Institute for Medical Research, Ministry of Health Malaysia, Kuala Lumpur, Malaysia.ORCID 0000-0002-3223-9265
Siang Ling GohFaculty of Science, University of Malaya, Institute of Biological Sciences, Kuala Lumpur, Malaysia.
Xun Jin NgMolecular Pathology Unit, Cancer Research Centre, Institute for Medical Research, Ministry of Health Malaysia, Kuala Lumpur, Malaysia.
Chun Shen LimFaculty of Science, University of Malaya, Institute of Biological Sciences, Kuala Lumpur, Malaysia.ORCID 0000-0001-7015-0125
Wee Ric KimMolecular Pathology Unit, Cancer Research Centre, Institute for Medical Research, Ministry of Health Malaysia, Kuala Lumpur, Malaysia.
Taznim Begam Binti Mohd MohidinFaculty of Science, University of Malaya, Institute of Biological Sciences, Kuala Lumpur, Malaysia.ORCID 0000-0002-5996-8409
Nor Soleha Mohd DaliHaematology Unit, Cancer Research Centre, Institute for Medical Research, Ministry of Health Malaysia, Kuala Lumpur, Malaysia.
Siew Hoon OngMolecular Pathology Unit, Cancer Research Centre, Institute for Medical Research, Ministry of Health Malaysia, Kuala Lumpur, Malaysia.
Chun Ying WongDepartment of Otorhinolaryngology, Sarawak General Hospital, Ministry of Health Malaysia, Jalan Hospital, Kuching, Sarawak, Malaysia.
Halimuddin SawaliDepartment of Otorhinolaryngology, Queen Elizabeth Hospital, Ministry of Health Malaysia, Kota Kinabalu, Sabah, Malaysia.
Yoke Yeow YapDepartment of Otorhinolaryngology, Kuala Lumpur Hospital, Ministry of Health Malaysia, Kuala Lumpur, Malaysia.
Faridah HassanDepartment of Otorhinolaryngology, Selayang Hospital, Ministry of Health Malaysia, Batu Caves, Selangor, Malaysia.
Kin Choo PuaDepartment of Otorhinolaryngology, Pulau Pinang Hospital, Ministry of Health Malaysia, Georgetown, Pulau Pinang, Malaysia.
Cheng Eng KoayGleneagles Kuala Lumpur Hospital, Kuala Lumpur, Malaysia.
Ching Ching NgFaculty of Science, University of Malaya, Institute of Biological Sciences, Kuala Lumpur, Malaysia.
Alan Soo-Beng KhooMolecular Pathology Unit, Cancer Research Centre, Institute for Medical Research, Ministry of Health Malaysia, Kuala Lumpur, Malaysia.ORCID 0000-0002-8268-5271
Malaysian Nasopharyngeal Carcinoma Study Group
Ministry of Health · MYUniversity of Malaya · MYHospital Kuala Lumpur · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nasopharyngeal carcinoma (NPC) is originated from the epithelial cells of nasopharynx, Epstein-Barr virus (EBV)-associated and has the highest incidence and mortality rates in Southeast Asia. Late presentation is a common issue and early detection could be the key to reduce the disease burden. Sensitivity of plasma EBV DNA, an established NPC biomarker, for Stage I NPC is controversial. Most newly reported NPC biomarkers have neither been externally validated nor compared to the established ones. This causes difficulty in planning for cost-effective early detection strategies. Our study systematically evaluated six established and four new biomarkers in NPC cases, population controls and hospital controls. We showed that BamHI-W 76 bp remains the most sensitive plasma biomarker, with 96.7% (29/30), 96.7% (58/60) and 97.4% (226/232) sensitivity to detect Stage I, early stage and all NPC, respectively. Its specificity was 94.2% (113/120) against population controls and 90.4% (113/125) against hospital controls. Diagnostic accuracy of BamHI-W 121 bp and ebv-miR-BART7-3p were validated. Hsa-miR-29a-3p and hsa-miR-103a-3p were not, possibly due to lower number of advanced stage NPC cases included in this subset. Decision tree modeling suggested that combination of BamHI-W 76 bp and VCA IgA or EA IgG may increase the specificity or sensitivity to detect NPC. EBNA1 99 bp could identify NPC patients with poor prognosis in early and advanced stage NPC. Our findings provided evidence for improvement in NPC screening strategies, covering considerations of opportunistic screening, combining biomarkers to increase sensitivity or specificity and testing biomarkers from single sampled specimen to avoid logistic problems of resampling.

Indexed as

Antibodies, ViralBiomarkers, TumorCase-Control StudiesDNA, ViralEnzyme-Linked Immunosorbent AssayEpstein-Barr Virus InfectionsHerpesvirus 4, HumanHumansMicroRNAsNasopharyngeal CarcinomaNasopharyngeal NeoplasmsNeoplasm StagingPrognosisAntibodies, ViralBiomarkers, TumorDNA, ViralMicroRNAsbiomarkersearly detectionEpstein-Barr virusnasopharyngeal carcinomaprognosissystematic comparison

Identifiers

PMID31469434
PMCPMC7065012
OpenAlexW2970971599

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.