Evidence map›Paper›PMID 31467320›Full record

ArticleScientific reports2019

The horizontal gene transfer of Agrobacterium T-DNAs into the series Batatas (Genus Ipomoea) genome is not confined to hexaploid sweetpotato.

Dora G Quispe-Huamanquispe, Godelieve Gheysen, Jun Yang, Robert Jarret, Genoveva Rossel, Jan F Kreuze

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. The Promise of Synthetic Biology for Redesigning Plant Architecture.International journal of molecular sciences · 2026
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  5. Article
  6. Functional Analysis of Naturally IntegratedPlants (Basel, Switzerland) · 2025
    Article
  7. Review
  8. Article
  9. Plants (Basel, Switzerland) · 2023
    Article
  10. Biodiversity ofInternational journal of molecular sciences · 2023
    Article
  11. Article
  12. Conservation of anFrontiers in plant science · 2022
    Article
  13. PeerJ · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dora G Quispe-HuamanquispeDepartment of Biotechnology, Ghent University, 9000, Ghent, Belgium.ORCID http://orcid.org/0000-0002-3738-9182
Godelieve GheysenDepartment of Biotechnology, Ghent University, 9000, Ghent, Belgium.ORCID http://orcid.org/0000-0003-1929-5059
Jun YangShanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai, China.
Robert JarretUSDA-ARS/PGRU, Griffin, GA, 30223, USA.ORCID http://orcid.org/0000-0002-0426-6186
Genoveva RosselInternational Potato Center (CIP), Lima, Peru.
Jan F KreuzeInternational Potato Center (CIP), Lima, Peru. j.kreuze@cgiar.org.ORCID http://orcid.org/0000-0002-6116-9200

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The discovery of the insertion of IbT-DNA1 and IbT-DNA2 into the cultivated (hexaploid) sweetpotato [Ipomoea batatas (L.) Lam.] genome constitutes a clear example of an ancient event of Horizontal Gene Transfer (HGT). However, it remains unknown whether the acquisition of both IbT-DNAs by the cultivated sweetpotato occurred before or after its speciation. Therefore, this study aims to evaluate the presence of IbT-DNAs in the genomes of sweetpotato's wild relatives belonging to the taxonomic group series Batatas. Both IbT-DNA1 and IbT-DNA2 were found in tetraploid I. batatas (L.) Lam. and had highly similar sequences and at the same locus to those found in the cultivated sweetpotato. Moreover, IbT-DNA1 was also found in I. cordatotriloba and I. tenuissima while IbT-DNA2 was detected in I. trifida. This demonstrates that genome integrated IbT-DNAs are not restricted to the cultivated sweetpotato but are also present in tetraploid I. batatas and other related species.

Indexed as

Gene Transfer, HorizontalPolyploidyAgrobacteriumDNA, BacterialEvolution, MolecularGenome, PlantIpomoea batatasPhylogenyDNA, BacterialT-DNA

Identifiers

PMID31467320
PMCPMC6715720

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.