Evidence map›Paper›PMID 31465541›Full record

ArticleThe New phytologist2020

Sequence-based mapping identifies a candidate transcription repressor underlying awn suppression at the B1 locus in wheat.

Noah DeWitt, Mohammed Guedira, Edwin Lauer, Martin Sarinelli, Priyanka Tyagi, Daolin Fu, QunQun Hao, J Paul Murphy, David Marshall, Alina Akhunova and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
9.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Article
  3. TaAGL6-B1 identified as a candidate gene for the dominant awn-inhibitor locus B2 in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Quantitative trait loci mapping of resistance to pre-harvest sprouting in the Norwegian spring wheat breeding line T7347.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Noah DeWittDepartment of Crop and Soil Sciences, North Carolina State University, Raleigh, NC, 27695, USA.ORCID 0000-0001-9055-993X
Mohammed GuediraDepartment of Crop and Soil Sciences, North Carolina State University, Raleigh, NC, 27695, USA.ORCID 0000-0003-3953-6112
Edwin LauerDepartment of Crop and Soil Sciences, North Carolina State University, Raleigh, NC, 27695, USA.
Martin SarinelliDepartment of Crop and Soil Sciences, North Carolina State University, Raleigh, NC, 27695, USA.
Priyanka TyagiDepartment of Crop and Soil Sciences, North Carolina State University, Raleigh, NC, 27695, USA.
Daolin FuDepartment of Plant Sciences, University of Idaho, Moscow, ID, 83844, USA.ORCID 0000-0002-1870-2989
QunQun HaoDepartment of Plant Sciences, University of Idaho, Moscow, ID, 83844, USA.
J Paul MurphyDepartment of Crop and Soil Sciences, North Carolina State University, Raleigh, NC, 27695, USA.
David MarshallDepartment of Crop and Soil Sciences, North Carolina State University, Raleigh, NC, 27695, USA.ORCID 0000-0003-0817-100X
Alina AkhunovaDepartment of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA.ORCID 0000-0002-2714-3525
Katherine JordanDepartment of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA.
Eduard AkhunovDepartment of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA.ORCID 0000-0002-0416-5211
Gina Brown-GuediraDepartment of Crop and Soil Sciences, North Carolina State University, Raleigh, NC, 27695, USA.ORCID 0000-0002-1958-2827
North Carolina State University · USKansas State University · USAgricultural Research Service · USUniversity of Idaho · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Awns are stiff, hair-like structures which grow from the lemmas of wheat (Triticum aestivum) and other grasses that contribute to photosynthesis and play a role in seed dispersal. Variation in awn length in domesticated wheat is controlled primarily by three major genes, most commonly the dominant awn suppressor Tipped1 (B1). This study identifies a transcription repressor responsible for awn inhibition at the B1 locus. Association mapping was combined with analysis in biparental populations to delimit B1 to a distal region of 5AL colocalized with QTL for number of spikelets per spike, kernel weight, kernel length, and test weight. Fine-mapping located B1 to a region containing only two predicted genes, including C2H2 zinc finger transcriptional repressor TraesCS5A02G542800 upregulated in developing spikes of awnless individuals. Deletions encompassing this candidate gene were present in awned mutants of an awnless wheat. Sequence polymorphisms in the B1 coding region were not observed in diverse wheat germplasm whereas a nearby polymorphism was highly predictive of awn suppression. Transcriptional repression by B1 is the major determinant of awn suppression in global wheat germplasm. It is associated with increased number of spikelets per spike and decreased kernel size.

Indexed as

Chromosome MappingGenetic LociSuppression, GeneticTranscription, GeneticAmino Acid SequenceBase SequenceChromosome SegregationGene DeletionGene Expression Regulation, PlantGenes, PlantGenetic Association StudiesGenetic MarkersGenome-Wide Association StudyHaplotypesInbreedingOrgan SizeGenetic MarkersPlant ProteinsRepressor ProteinsawnsB1 locusfine mappingpositional cloningwheat (Triticum aestivum)zinc finger protein

Identifiers

PMID31465541
PMCPMC6916393
OpenAlexW2971337685

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.