Evidence map›Paper›PMID 31462856›Full record

ArticleSensors and actuators. B, Chemical2019

Label-Free Pathogen Detection by a Deoxyribozyme Cascade with Visual Signal Readout.

Adam J Reed, Ryan P Connelly, Allison Williams, Maithi Tran, Byoung-Shik Shim, Hyeryun Choe, Yulia V Gerasimova

Abstract read
In one paragraph

Article in Sensors and actuators. B, Chemical, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Adam J ReedChemistry Department, University of Central Florida, Orlando, Florida 32816, United States.
Ryan P ConnellyChemistry Department, University of Central Florida, Orlando, Florida 32816, United States.
Allison WilliamsChemistry Department, University of Central Florida, Orlando, Florida 32816, United States.
Maithi TranChemistry Department, University of Central Florida, Orlando, Florida 32816, United States.
Byoung-Shik ShimDepartment of Immunology and Microbiology, Scripps Research Institute, Jupiter, Florida 33458, United States.
Hyeryun ChoeDepartment of Immunology and Microbiology, Scripps Research Institute, Jupiter, Florida 33458, United States.
Yulia V GerasimovaChemistry Department, University of Central Florida, Orlando, Florida 32816, United States.
University of Central Florida · USScripps Research Institute · US

Funding

Phosphatidylserine Receptors in Flavivirus InfectionR01AI110692 · NIAID · SCRIPPS FLORIDA · PI CHOE, HYERYUN · 2014 to 2018
$2.4M
Development of a method for visual detection of Mycobacterium tuberculosis complexR21AI123876 · NIAID · UNIVERSITY OF CENTRAL FLORIDA · PI GERASIMOVA, YULIA, ROHDE, KYLE H · 2017 to 2018
$383k
NIAID NIH HHS R01 AI110692NIAID NIH HHS R21 AI123876
6 · The paper itself

Abstract

A colorimetric nucleic acid based test for label-free pathogen detection has been developed and used for the detection of the Zika virus. The test relies on nucleic acid sequence-based amplification (NASBA) of a viral RNA followed by interrogation of the amplicon by a cascade of deoxyribozymes constituting a visual split deoxyribozyme (vsDz) probe. The probe consists of a split phosphodiesterase deoxyribozyme, which forms its catalytic core upon binding to a specific amplicon fragment. The catalytically active complex recognizes and cleaves an inhibited peroxidase-like deoxyribozyme (PDz), thereby activating it. Active PDz catalyzes hydrogen peroxide-mediated oxidation of a colorless substrate into a colored product, thereby generating a visible signal. Viral RNA (10

Indexed as

colorimetric testdeoxyribozyme cascadeG-quadruplex peroxidaseisothermal amplificationNASBAPathogen detection

Identifiers

PMID31462856
PMCPMC6713451
OpenAlexW2902751803

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.