Evidence map›Paper›PMID 31462570›Full record

ArticleJournal of virology2019

Tyr82 Amino Acid Mutation in PB1 Polymerase Induces an Influenza Virus Mutator Phenotype.

Tadasuke Naito, Kazumasa Shirai, Kotaro Mori, Hidetaka Muratsu, Hiroshi Ushirogawa, Ryosuke L Ohniwa, Kousuke Hanada, Mineki Saito

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The substitution spectra of coronavirus genomes.Briefings in bioinformatics · 2022
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Tadasuke NaitoDepartment of Microbiology, Kawasaki Medical School, Okayama, Japan tadanaito@med.kawasaki-m.ac.jp mineki@med.kawasaki-m.ac.jp.
Kazumasa ShiraiDepartment of Bioscience and Bioinformatics, Kyusyu Institute of Technology, Fukuoka, Japan.
Kotaro MoriDepartment of Microbiology, Kawasaki Medical School, Okayama, Japan.
Hidetaka MuratsuDepartment of Microbiology, Kawasaki Medical School, Okayama, Japan.
Hiroshi UshirogawaDepartment of Microbiology, Kawasaki Medical School, Okayama, Japan.
Ryosuke L OhniwaDivision of Biomedical Science, Faculty of Medicine, University of Tsukuba, Ibaraki, Japan.
Kousuke HanadaDepartment of Bioscience and Bioinformatics, Kyusyu Institute of Technology, Fukuoka, Japan.
Mineki SaitoDepartment of Microbiology, Kawasaki Medical School, Okayama, Japan tadanaito@med.kawasaki-m.ac.jp mineki@med.kawasaki-m.ac.jp.
Kawasaki Medical School · JPNational Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In various positive-sense single-stranded RNA viruses, a low-fidelity viral RNA-dependent RNA polymerase (RdRp) confers attenuated phenotypes by increasing the mutation frequency. We report a negative-sense single-stranded RNA virus RdRp mutant strain with a mutator phenotype. Based on structural data of RdRp, rational targeting of key residues, and screening of fidelity variants, we isolated a novel low-fidelity mutator strain of influenza virus that harbors a Tyr82-to-Cys (Y82C) single-amino-acid substitution in the PB1 polymerase subunit. The purified PB1-Y82C polymerase indeed showed an increased frequency of misincorporation compared with the wild-type PB1 in an

Indexed as

MutationAmino Acid SequenceAmino Acid SubstitutionAnimalsDogsHEK293 CellsHumansInfluenza A virusMadin Darby Canine Kidney CellsModels, MolecularPhenotypePolymorphism, Single NucleotideRNA-Dependent RNA PolymeraseRNA, ViralViral ProteinsVirus Replicationinfluenza virus polymerase basic protein 1RNA-Dependent RNA PolymeraseRNA, ViralViral ProteinsfidelityinfluenzamutatorRNA polymerases

Identifiers

PMID31462570
PMCPMC6819930
OpenAlexW2970236921

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.